RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 H2AFXP16104 143 aaPredicted RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 MARSP56192 900 aaKnown RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 KRT83P78385 493 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 CXCL9Q07325 125 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 SF3B2Q13435 895 aaKnown RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 LRRC41Q15345 812 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 ZC3H3Q8IXZ2 948 aaKnown RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 SLF1Q9BQI6 1058 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 TMEM39BQ9GZU3 492 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 HAUS4Q9H6D7 363 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 VEZTQ9HBM0 779 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 REXO2Q9Y3B8 237 aaKnown RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 POTEFA5A3E0 1075 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 GCOM1H8Y6P7 765 aaPredicted RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 POLR2MP0CAP2 368 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 HERC4Q5GLZ8 1057 aaPredicted RBP15.86■□□□□ 0.13
MKS1-203ENST00000393120 ZNF569Q5MCW4 686 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 NCAPH2Q6IBW4 605 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 POTEGQ6S5H5 508 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 POTEEQ6S8J3 1075 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 COL4A3BPQ9Y5P4 624 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 EIF3CLB5ME19 914 aaKnown RBP15.85■□□□□ 0.13
MKS1-203ENST00000393120 NKRFO15226 690 aaKnown RBP eCLIP15.85■□□□□ 0.13
MKS1-203ENST00000393120 ASNSP08243 561 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 CYLC1P35663 651 aaPredicted RBP15.85■□□□□ 0.13
MKS1-203ENST00000393120 ZNF76P36508 570 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 KLK7P49862 253 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 PPP2R3AQ06190 1150 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 GIT2Q14161 759 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 EDRF1Q3B7T1 1238 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 FBXO38Q6PIJ6 1188 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 EIF3CQ99613 913 aaKnown RBP15.85■□□□□ 0.13
MKS1-203ENST00000393120 KCTD10Q9H3F6 313 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 PLAGL2Q9UPG8 496 aa15.85■□□□□ 0.13
MKS1-203ENST00000393120 CTAGE9A4FU28 777 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 WNT10BO00744 389 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 TUBB4BP68371 445 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 RSRC2Q7L4I2 434 aaKnown RBP15.84■□□□□ 0.13
MKS1-203ENST00000393120 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 PCMTD1Q96MG8 357 aaPredicted RBP15.84■□□□□ 0.13
MKS1-203ENST00000393120 EMILIN3Q9NT22 766 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 CDC23Q9UJX2 597 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 TRAF5O00463 557 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 KRT18P05783 430 aaKnown RBP15.84■□□□□ 0.13
MKS1-203ENST00000393120 MUTP22033 750 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 PTGER2P43116 358 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 PSMC6P62333 389 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 CIAPIN1Q6FI81 312 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 CYP2W1Q8TAV3 490 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 HSD17B14Q9BPX1 270 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 NHEJ1Q9H9Q4 299 aaPredicted RBP15.84■□□□□ 0.13
MKS1-203ENST00000393120 TUFT1Q9NNX1 390 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
MKS1-203ENST00000393120 DDX41Q9UJV9 622 aaKnown RBP15.84■□□□□ 0.13
MKS1-203ENST00000393120 NPHP3-ACAD11A0A0J9YXS1 232 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 PSMD10O75832 226 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 EYA4O95677 639 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 CFBP00751 764 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 TAL1P17542 331 aaPredicted RBP15.83■□□□□ 0.12
MKS1-203ENST00000393120 PPP2R5CQ13362 524 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 MIGA2Q7L4E1 593 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 OTOP1Q7RTM1 612 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 CDAN1Q8IWY9 1227 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 SLC35F6Q8N357 371 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 SLC5A5Q92911 643 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 EIF2AK1Q9BQI3 630 aaKnown RBP15.83■□□□□ 0.12
MKS1-203ENST00000393120 MYOZ2Q9NPC6 264 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 OGFRQ9NZT2 677 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
MKS1-203ENST00000393120 PHF20L1A8MW92 1017 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 ABL1P00519 1130 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 ZNF280AP59817 542 aaPredicted RBP15.82■□□□□ 0.12
MKS1-203ENST00000393120 HERVK_113P62684 666 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 TNIP1Q15025 636 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 CCDC174Q6PII3 467 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 EPM2AIP1Q7L775 607 aaPredicted RBP15.82■□□□□ 0.12
MKS1-203ENST00000393120 DEFB132Q7Z7B7 95 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 GPR161Q8N6U8 529 aaKnown RBP15.82■□□□□ 0.12
MKS1-203ENST00000393120 CEP112Q8N8E3 955 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 TBC1D5Q92609 795 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 NAPGQ99747 312 aaPredicted RBP15.82■□□□□ 0.12
MKS1-203ENST00000393120 WDR18Q9BV38 432 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 FGFBP2Q9BYJ0 223 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 TRAF3IP3Q9Y228 551 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 EML1O00423 815 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
MKS1-203ENST00000393120 BMT2Q1RMZ1 405 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 NBPF9Q3BBW0 867 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 CEP55Q53EZ4 464 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 TRIM59Q8IWR1 403 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 EHBP1Q8NDI1 1231 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms