RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
MKS1-202ENST00000393119 CEP135Q66GS9 1140 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 TPH2Q8IWU9 490 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 FAM20AQ96MK3 541 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 NAP1L4Q99733 375 aaKnown RBP16.71■□□□□ 0.27
MKS1-202ENST00000393119 ZHX3Q9H4I2 956 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 ZNF408Q9H9D4 720 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 GINM1Q9NU53 330 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 TAB2Q9NYJ8 693 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 STK17AQ9UEE5 414 aa16.71■□□□□ 0.27
MKS1-202ENST00000393119 ATP9AO75110 1047 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 FSTL1Q12841 308 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.26
MKS1-202ENST00000393119 NOL9Q5SY16 702 aaKnown RBP16.71■□□□□ 0.26
MKS1-202ENST00000393119 GADL1Q6ZQY3 521 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 GPBP1Q86WP2 473 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 KIAA1524Q8TCG1 905 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 DUSP9Q99956 384 aaKnown RBP16.71■□□□□ 0.26
MKS1-202ENST00000393119 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 SEMA6BQ9H3T3 888 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 KCNH7Q9NS40 1196 aa16.71■□□□□ 0.26
MKS1-202ENST00000393119 SFI1A8K8P3 1242 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
MKS1-202ENST00000393119 SLITRK3O94933 977 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 CYP11B2P19099 503 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 ITGB3BPQ13352 177 aaPredicted RBP16.7■□□□□ 0.26
MKS1-202ENST00000393119 HYIQ5T013 277 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 MAP1SQ66K74 1059 aaPredicted RBP16.7■□□□□ 0.26
MKS1-202ENST00000393119 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 C12orf42Q96LP6 360 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 RMDN3Q96TC7 470 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
MKS1-202ENST00000393119 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 CENPFP49454 3210 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 GLTPD2A6NH11 291 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 USP27XA6NNY8 438 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 TBX3O15119 743 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 GAS7O60861 476 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 SLC12A3P55017 1021 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 CCZ1BP86790 482 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 CCZ1P86791 482 aaPredicted RBP16.7■□□□□ 0.26
MKS1-202ENST00000393119 AMPD3Q01432 767 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 KRT31Q15323 416 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 BANK1Q8NDB2 785 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 BHMT2Q9H2M3 363 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
MKS1-202ENST00000393119 CSADQ9Y600 493 aa16.7■□□□□ 0.26
MKS1-202ENST00000393119 RPTORQ8N122 1335 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
MKS1-202ENST00000393119 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
MKS1-202ENST00000393119 NR1I3Q14994 352 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 PGM5Q15124 567 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 UNC13DQ70J99 1090 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 TMEM150BA6NC51 233 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 RPA1P27694 616 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 ADKP55263 362 aaKnown RBP16.69■□□□□ 0.26
MKS1-202ENST00000393119 COASYQ13057 564 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 TRAF1Q13077 416 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 CPLX3Q8WVH0 158 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
MKS1-202ENST00000393119 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 RUSC1Q9BVN2 902 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
MKS1-202ENST00000393119 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 MAGEF1Q9HAY2 307 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
MKS1-202ENST00000393119 RLFQ13129 1914 aa16.68■□□□□ 0.26
MKS1-202ENST00000393119 CASP5P51878 434 aa16.68■□□□□ 0.26
MKS1-202ENST00000393119 TKFCQ3LXA3 575 aa16.68■□□□□ 0.26
MKS1-202ENST00000393119 HSD17B14Q9BPX1 270 aa16.68■□□□□ 0.26
MKS1-202ENST00000393119 PANK4Q9NVE7 773 aa16.68■□□□□ 0.26
MKS1-202ENST00000393119 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
MKS1-202ENST00000393119 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 TESPA1A2RU30 521 aaPredicted RBP16.67■□□□□ 0.26
MKS1-202ENST00000393119 KCNJ18B7U540 433 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 DHX15O43143 795 aaKnown RBP16.67■□□□□ 0.26
MKS1-202ENST00000393119 MYL1P05976 194 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 SKILP12757 684 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 MCF2L2Q86YR7 1114 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 PXMP2Q9NR77 195 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 GJA5P36382 358 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 EHHADHQ08426 723 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 TCP11X2Q5H9J9 407 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms