RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TANGO6Q9C0B7 1094 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 ABHD10Q9NUJ1 306 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
ACTN4-202ENST00000390009 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
ACTN4-202ENST00000390009 KRT18P05783 430 aaKnown RBP20.22■□□□□ 0.83
ACTN4-202ENST00000390009 CYP4A11Q02928 519 aa20.22■□□□□ 0.83
ACTN4-202ENST00000390009 RAD51AP2Q09MP3 1159 aa20.22■□□□□ 0.83
ACTN4-202ENST00000390009 PABPC4Q13310 644 aaKnown RBP eCLIP20.22■□□□□ 0.835e-24■■□□□ 14.4
ACTN4-202ENST00000390009 CEP55Q53EZ4 464 aa20.22■□□□□ 0.83
ACTN4-202ENST00000390009 LRCH2Q5VUJ6 765 aa20.22■□□□□ 0.83
ACTN4-202ENST00000390009 EIF2AK1Q9BQI3 630 aaKnown RBP20.22■□□□□ 0.83
ACTN4-202ENST00000390009 POLR3CQ9BUI4 534 aaPredicted RBP20.22■□□□□ 0.83
ACTN4-202ENST00000390009 ZMYND15Q9H091 742 aa20.22■□□□□ 0.83
ACTN4-202ENST00000390009 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
ACTN4-202ENST00000390009 PSMD10O75832 226 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 VCAM1P19320 739 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 ETF1P62495 437 aaKnown RBP20.21■□□□□ 0.83
ACTN4-202ENST00000390009 MIIPQ5JXC2 388 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 ANGEL2Q5VTE6 544 aaKnown RBP20.21■□□□□ 0.83
ACTN4-202ENST00000390009 FOXR2Q6PJQ5 311 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 RAD9BQ6WBX8 426 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 SYT2Q8N9I0 419 aaPredicted RBP20.21■□□□□ 0.83
ACTN4-202ENST00000390009 TSC1Q92574 1164 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 SLC5A5Q92911 643 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 DESI2Q9BSY9 194 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 NOC4LQ9BVI4 516 aaKnown RBP20.21■□□□□ 0.83
ACTN4-202ENST00000390009 EMILIN3Q9NT22 766 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 TBC1D7Q9P0N9 293 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 PCDHA2Q9Y5H9 948 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 GOLGA6L9A6NEM1 432 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 NFIBO00712 420 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 FLOT1O75955 427 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 FGFR1OPO95684 399 aaKnown RBP20.21■□□□□ 0.83
ACTN4-202ENST00000390009 KRT9P35527 623 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 HERC4Q5GLZ8 1057 aaPredicted RBP20.21■□□□□ 0.83
ACTN4-202ENST00000390009 TRIM65Q6PJ69 517 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 SLC30A10Q6XR72 485 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 CPXCR1Q8N123 301 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 CLEC4DQ8WXI8 215 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 TSG101Q99816 390 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 FGFBP2Q9BYJ0 223 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 SLC38A10Q9HBR0 1119 aa20.21■□□□□ 0.83
ACTN4-202ENST00000390009 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■■■□ 25.7
ACTN4-202ENST00000390009 CTIFO43310 598 aaKnown RBP20.2■□□□□ 0.82
ACTN4-202ENST00000390009 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 PPP2R5CQ13362 524 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 APOBEC3FQ8IUX4 373 aaKnown RBP20.2■□□□□ 0.82
ACTN4-202ENST00000390009 ZFP91Q96JP5 570 aaPredicted RBP20.2■□□□□ 0.82
ACTN4-202ENST00000390009 RGL1Q9NZL6 768 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 TTC26A0AVF1 554 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 USP14P54578 494 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 SETQ01105 290 aaPredicted RBP20.2■□□□□ 0.82
ACTN4-202ENST00000390009 SPP2Q13103 211 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 ZCWPW2Q504Y3 356 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 LRRC55Q6ZSA7 311 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 SCYL3Q8IZE3 742 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 TRPM4Q8TD43 1214 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 RAVER2Q9HCJ3 691 aaKnown RBP20.2■□□□□ 0.82
ACTN4-202ENST00000390009 ZNF112Q9UJU3 913 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
ACTN4-202ENST00000390009 GAS7O60861 476 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 CCDC175P0C221 793 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 ALAS1P13196 640 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 GIT2Q14161 759 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 PRAMEF18Q5VWM3 479 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 MCF2L2Q86YR7 1114 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 TMTC1Q8IUR5 882 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 KCTD17Q8N5Z5 321 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 HSD17B14Q9BPX1 270 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 PDCL3Q9H2J4 239 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 RPAP3Q9H6T3 665 aaPredicted RBP20.19■□□□□ 0.82
ACTN4-202ENST00000390009 COL20A1Q9P218 1284 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 RABGAP1Q9Y3P9 1069 aa20.19■□□□□ 0.82
ACTN4-202ENST00000390009 CHMP2AO43633 222 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 ARP10275 920 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 ZKSCAN4Q969J2 545 aaPredicted RBP20.18■□□□□ 0.82
ACTN4-202ENST00000390009 WRNIP1Q96S55 665 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 ZNF577Q9BSK1 485 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 BHMT2Q9H2M3 363 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 ZHX3Q9H4I2 956 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 TUFT1Q9NNX1 390 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 GPRC5DQ9NZD1 345 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 ADGRG1Q9Y653 693 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 PHIPQ8WWQ0 1821 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 PHLPP2Q6ZVD8 1323 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 RPTORQ8N122 1335 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 EYA4O95677 639 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 ERVK-24P63145 666 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 GHRHRQ02643 423 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 SYCP1Q15431 976 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 REEP2Q9BRK0 252 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 DNAI1Q9UI46 699 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 CAPN11Q9UMQ6 739 aa20.18■□□□□ 0.82
ACTN4-202ENST00000390009 LUC7L2Q9Y383 392 aaKnown RBP20.18■□□□□ 0.82
ACTN4-202ENST00000390009 POLR2AP24928 1970 aaKnown RBP20.18■□□□□ 0.82
ACTN4-202ENST00000390009 BACE1P56817 501 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 CTTNQ14247 550 aaKnown RBP20.17■□□□□ 0.82
ACTN4-202ENST00000390009 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms