RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 TCEAL1Q15170 157 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 SMAD2Q15796 467 aaKnown RBP2.78□□□□□ -1.96
SNORA40-201ENST00000388090 INF2Q27J81 1249 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 RNF151Q2KHN1 245 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 PHF19Q5T6S3 580 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 SYCE2Q6PIF2 218 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 GAREM2Q75VX8 874 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 TAB3Q8N5C8 712 aaPredicted RBP2.78□□□□□ -1.96
SNORA40-201ENST00000388090 OR14A2Q96R54 314 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 DPYSL5Q9BPU6 564 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 BTG4Q9NY30 223 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 CLEC1BQ9P126 229 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 WHRNQ9P202 907 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 X6R8D5 127 aa2.78□□□□□ -1.96
SNORA40-201ENST00000388090 H0Y858 1186 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 MATN2O00339 956 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 PEX11BO96011 259 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 PLS3P13797 630 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 HIBADHP31937 336 aaKnown RBP2.77□□□□□ -1.97
SNORA40-201ENST00000388090 AMPD2Q01433 879 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 FOXL1Q12952 345 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 TMC4Q7Z404 712 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 NLRP10Q86W26 655 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 REXO1L1PQ8IX06 675 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 DTX3Q8N9I9 347 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 COPS5Q92905 334 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 FAM161BQ96MY7 647 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 PLA2G12BQ9BX93 195 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 KRTAP1-5Q9BYS1 174 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 TLR9Q9NR96 1032 aa2.77□□□□□ -1.97
SNORA40-201ENST00000388090 CGGBP1Q9UFW8 167 aaPredicted RBP2.77□□□□□ -1.97
SNORA40-201ENST00000388090 ZNF214Q9UL59 606 aaPredicted RBP2.77□□□□□ -1.97
SNORA40-201ENST00000388090 HGSO14964 777 aaPredicted RBP2.76□□□□□ -1.97
SNORA40-201ENST00000388090 CDC14BO60729 498 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 TADA3O75528 432 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 GCP02774 474 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 APOBRQ0VD83 1088 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 GRB10Q13322 594 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 USP10Q14694 798 aaKnown RBP2.76□□□□□ -1.97
SNORA40-201ENST00000388090 UNC5AQ6ZN44 842 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 TMPRSS6Q8IU80 811 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 ARHGEF39Q8N4T4 335 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 HAUS7Q99871 368 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 KLHL25Q9H0H3 589 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 GPRC5CQ9NQ84 441 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 GPRC5BQ9NZH0 403 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 ADAMTS1Q9UHI8 967 aa2.76□□□□□ -1.97
SNORA40-201ENST00000388090 KRTAP23-1A1A580 65 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 CDK4P11802 303 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 SLC25A3Q00325 362 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 NOLC1Q14978 699 aaKnown RBP eCLIP2.75□□□□□ -1.97
SNORA40-201ENST00000388090 EAPPQ56P03 285 aaPredicted RBP2.75□□□□□ -1.97
SNORA40-201ENST00000388090 EMC4Q5J8M3 183 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 CEP68Q76N32 757 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 RNF34Q969K3 372 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 TM9SF2Q99805 663 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 RIOX1Q9H6W3 641 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 KCND1Q9NSA2 647 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 PARPBPQ9NWS1 579 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 ZNRF3Q9ULT6 936 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 PCDHB4Q9Y5E5 795 aa2.75□□□□□ -1.97
SNORA40-201ENST00000388090 ZNF568Q3ZCX4 644 aa2.74□□□□□ -1.97
SNORA40-201ENST00000388090 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
SNORA40-201ENST00000388090 MBNL2Q5VZF2 373 aaKnown RBP2.74□□□□□ -1.97
SNORA40-201ENST00000388090 ADGRG3Q86Y34 549 aa2.74□□□□□ -1.97
SNORA40-201ENST00000388090 TRMT2BQ96GJ1 504 aaKnown RBP2.74□□□□□ -1.97
SNORA40-201ENST00000388090 RCC1LQ96I51 464 aaKnown RBP2.74□□□□□ -1.97
SNORA40-201ENST00000388090 BRIP1Q9BX63 1249 aa2.74□□□□□ -1.97
SNORA40-201ENST00000388090 ZNHIT2Q9UHR6 403 aa2.74□□□□□ -1.97
SNORA40-201ENST00000388090 ZAR1LA6NP61 321 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 RHOBTB3O94955 611 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 EPHX1P07099 455 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 CD38P28907 300 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 CTGFP29279 349 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 MSX2P35548 267 aaPredicted RBP2.73□□□□□ -1.97
SNORA40-201ENST00000388090 RPS19P39019 145 aaKnown RBP2.73□□□□□ -1.97
SNORA40-201ENST00000388090 BCL6P41182 706 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 RPL11P62913 178 aaKnown RBP2.73□□□□□ -1.97
SNORA40-201ENST00000388090 SCRN1Q12765 414 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 PCOLCEQ15113 449 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 CHRNA2Q15822 529 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 STEAP3Q658P3 488 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 MICALCLQ6ZW33 695 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 STPG3Q8N7X2 389 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 NKD1Q969G9 470 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 CARD11Q9BXL7 1154 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 GBP3Q9H0R5 595 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 PLA2G3Q9NZ20 509 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 ZFP69BQ9UJL9 534 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 FBXL7Q9UJT9 491 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 GIT1Q9Y2X7 761 aa2.73□□□□□ -1.97
SNORA40-201ENST00000388090 TIMM13Q9Y5L4 95 aaPredicted RBP2.73□□□□□ -1.97
SNORA40-201ENST00000388090 ARNTLO00327 626 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 FBXO21O94952 628 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 CKMP06732 381 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 GUCY2CP25092 1073 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 CYP4F3Q08477 520 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 RRP1BQ14684 758 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms