RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 DDX3XO00571 662 aaKnown RBP eCLIP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ACOT8O14734 319 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 NRDCO43847 1150 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DKK1O94907 266 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ABHD16AO95870 558 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 FGF3P11487 239 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TNFRSF8P28908 595 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZEB1P37275 1124 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PLA2G5P39877 138 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CDKN2AP42771 156 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 MAPKAPK2P49137 400 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GAS1P54826 345 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ADPRHP54922 357 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HTRA4P83105 476 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TEFQ10587 303 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TOB2Q14106 344 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RRP1BQ14684 758 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GAB4Q2WGN9 574 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LDLRAD1Q5T700 205 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CDKAL1Q5VV42 579 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TBC1D9BQ66K14 1250 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HGSNATQ68CP4 663 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RPTNQ6XPR3 784 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 C22orf34Q6ZV56 151 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF584Q8IVC4 421 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TOP6BLQ8N6T0 577 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 BANK1Q8NDB2 785 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PRR7Q8TB68 274 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SLC25A43Q8WUT9 341 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DHX38Q92620 1227 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GPKOWQ92917 476 aaPredicted RBP eCLIP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DDX27Q96GQ7 796 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CEP63Q96MT8 703 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF285Q96NJ3 590 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GP6Q9HCN6 339 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TLR9Q9NR96 1032 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PLSCR4Q9NRQ2 329 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ARPP21Q9UBL0 812 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PCDHGC3Q9UN70 934 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 MMACHCQ9Y4U1 282 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 AFG3L2Q9Y4W6 797 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 USP3Q9Y6I4 520 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 A0A1W2PRX2 142 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PRR33A8MZF0 331 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ERVV-1B6SEH8 477 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 EML1O00423 815 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TRAF5O00463 557 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 AIREO43918 545 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SMARCA5O60264 1052 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LDB3O75112 727 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SNAI1O95863 264 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 C4BPAP04003 597 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PRKCGP05129 697 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 NCAM1P13591 858 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CYP7A1P22680 504 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SP100P23497 879 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SCTRP47872 440 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SCNN1DP51172 638 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 USP14P54578 494 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DUSP8Q13202 625 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SMAD4Q13485 552 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 BMT2Q1RMZ1 405 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF618Q5T7W0 954 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 NEK8Q86SG6 692 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ADIPOR2Q86V24 386 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SUPT20HQ8NEM7 779 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HASPINQ8TF76 798 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CYB5D2Q8WUJ1 264 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RFT1Q96AA3 541 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 COQ10AQ96MF6 247 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PNMA5Q96PV4 448 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LMF1Q96S06 567 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KLF6Q99612 283 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DUSP26Q9BV47 211 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF556Q9HAH1 456 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SH2B1Q9NRF2 756 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KCNG2Q9UJ96 466 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DIS3Q9Y2L1 958 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 FAN1Q9Y2M0 1017 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GIT1Q9Y2X7 761 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF281Q9Y2X9 895 aa-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GPC6Q9Y625 555 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1340P-201ENST00000384438 COL1A1P02452 1464 aaPredicted RBP-1.41□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 FBLL1A6NHQ2 334 aaKnown RBP-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 MANSC4A6NHS7 340 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 H3BRJ5 948 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 KIR2DS3K7RE56 304 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SOCS2O14508 198 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZNF354AO60765 605 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ZG16O60844 167 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 LRP3O75074 770 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 ABLIM3O94929 683 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 OATP04181 439 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 CD5P06127 495 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 SCP2P22307 547 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 HOXA11P31270 313 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 TXLNAP40222 546 aa-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 RRP1P56182 461 aaKnown RBP-1.41□□□□□ -2.64
RNU6-1340P-201ENST00000384438 MEF2BQ02080 365 aaPredicted RBP-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms