RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CD300LDQ6UXZ3 194 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 B3GNT8Q7Z7M8 397 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 MIB1Q86YT6 1006 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 TMEM151BQ8IW70 566 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 NIM1KQ8IY84 436 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 TOX2Q96NM4 488 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 BCAS3Q9H6U6 928 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 GCM1Q9NP62 436 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 CABP5Q9NP86 173 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 CD320Q9NPF0 282 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 ASH2LQ9UBL3 628 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 SMG5Q9UPR3 1016 aaKnown RBP4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 CD2APQ9Y5K6 639 aa4.79□□□□□ -1.64
RNU6-39P-201ENST00000384344 SLC27A2O14975 620 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 NUAK1O60285 661 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 PYGMP11217 842 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 PDE6AP16499 860 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 LINC00310P59036 64 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 TUSC3Q13454 348 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 ARHGAP44Q17R89 818 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 PLEKHG4Q58EX7 1191 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 FIGNQ5HY92 759 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 ZCCHC8Q6NZY4 707 aaKnown RBP4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 CNKSR3Q6P9H4 555 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 KCTD1Q719H9 257 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 FGD2Q7Z6J4 655 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 KIAA0907Q7Z7F0 614 aaPredicted RBP4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 IGDCC3Q8IVU1 814 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 CISD2Q8N5K1 135 aaKnown RBP4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 TTLL11Q8NHH1 800 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 ZSCAN18Q8TBC5 510 aaPredicted RBP4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 NINJ1Q92982 152 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 SCLYQ96I15 445 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 TMX1Q9H3N1 280 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 SRPK3Q9UPE1 567 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 COQ6Q9Y2Z9 468 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 KCTD3Q9Y597 815 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 ATP23Q9Y6H3 246 aa4.78□□□□□ -1.64
RNU6-39P-201ENST00000384344 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 IRS4O14654 1257 aaPredicted RBP4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 NKRFO15226 690 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 HIP1RO75146 1068 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 YBX3P16989 372 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 PI3P19957 117 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 FBLN1P23142 703 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 NEK4P51957 841 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 FOXO4P98177 505 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 ZNF124Q15973 351 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 TKFCQ3LXA3 575 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 CFAP100Q494V2 611 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 HABP4Q5JVS0 413 aaKnown RBP4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 AHI1Q8N157 1196 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 PPM1KQ8N3J5 372 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 C2orf69Q8N8R5 385 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 IGSF22Q8N9C0 903 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 ARRDC4Q8NCT1 418 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 SMARCC2Q8TAQ2 1214 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 MFSD3Q96ES6 412 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 CLUHP3Q96NS8 147 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 WRNIP1Q96S55 665 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 SAMD15Q9P1V8 674 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 TNPO3Q9Y5L0 923 aaKnown RBP4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 PMF1-BGLAPU3KQ54 211 aa4.77□□□□□ -1.65
RNU6-39P-201ENST00000384344 DBX1A6NMT0 343 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 SMARCA5O60264 1052 aaPredicted RBP4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 CYP7B1O75881 506 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 DNAJC8O75937 253 aaPredicted RBP4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 JMJD7P0C870 316 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 IGFBP6P24592 240 aaPredicted RBP4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 MC3RP41968 323 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 LACTBP83111 547 aaPredicted RBP4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 C21orf62-AS1Q17RA5 79 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 TMEM177Q53S58 311 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 BTBD8Q5XKL5 378 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 VASNQ6EMK4 673 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 OSTM1Q86WC4 334 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 PTRH1Q86Y79 214 aaKnown RBP4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 TTLL6Q8N841 843 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 PWWP2AQ96N64 755 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 TMEM209Q96SK2 561 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 RIC8BQ9NVN3 520 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 CBLCQ9ULV8 474 aa4.76□□□□□ -1.65
RNU6-39P-201ENST00000384344 SLC12A8A0AV02 714 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 ZNF561-AS1K7EIQ3 104 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 CKMP06732 381 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 C8BP07358 591 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 ATF2P15336 505 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 FAHP16930 419 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 STAT5AP42229 794 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 LIMS1P48059 325 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 EPHA5P54756 1037 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 GRIN1Q05586 938 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 SSPNQ14714 243 aa4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 SART3Q15020 963 aaKnown RBP4.75□□□□□ -1.65
RNU6-39P-201ENST00000384344 PAN2Q504Q3 1202 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms