RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 COPB1P53618 953 aaKnown RBP20.67■□□□□ 0.9
CSPG5-202ENST00000383738 MAP3K9P80192 1104 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 ODR4Q5SWX8 454 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 CUL4BQ13620 913 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 FAM47CQ5HY64 1035 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 NAA35Q5VZE5 725 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 MYOCDQ8IZQ8 938 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 SH2D3CQ8N5H7 860 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 VGLL2Q8N8G2 317 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 TBC1D5Q92609 795 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 N4BP2L2Q92802 583 aaPredicted RBP20.67■□□□□ 0.9
CSPG5-202ENST00000383738 HPS3Q969F9 1004 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 SYNCQ9H7C4 482 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 KCNK9Q9NPC2 374 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 TRPC6Q9Y210 931 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 DDTLA6NHG4 134 aaPredicted RBP20.67■□□□□ 0.9
CSPG5-202ENST00000383738 ARFGAP2Q8N6H7 521 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 TCP11Q8WWU5 503 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
CSPG5-202ENST00000383738 ZNF70Q9UC06 446 aaPredicted RBP20.67■□□□□ 0.9
CSPG5-202ENST00000383738 SERPINA10Q9UK55 444 aa20.67■□□□□ 0.9
CSPG5-202ENST00000383738 GPR75-ASB3A0A0A6YYF3 556 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 GTPBP6O43824 516 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-202ENST00000383738 ECE1P42892 770 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 LLGL1Q15334 1064 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 ACER1Q8TDN7 264 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 RSRC1Q96IZ7 334 aaKnown RBP20.66■□□□□ 0.9
CSPG5-202ENST00000383738 NT5C3AQ9H0P0 336 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 ODF2LQ9ULJ1 636 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 RAD9BQ6WBX8 426 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 REXO1L1PQ8IX06 675 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 IFT74Q96LB3 600 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 GGA3Q9NZ52 723 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 ZNF185O15231 689 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 PTPREP23469 700 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 MARK3P27448 753 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 ZFPM1Q8IX07 1006 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 SELENOOQ9BVL4 669 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 HAUS4Q9H6D7 363 aa20.66■□□□□ 0.9
CSPG5-202ENST00000383738 ARHGAP25P42331 645 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-202ENST00000383738 SLC10A4Q96EP9 437 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 RABGAP1Q9Y3P9 1069 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 CA8P35219 290 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 GALNT17Q6IS24 598 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 IFT20Q8IY31 132 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 EPB41L5Q9HCM4 733 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 PCDHA6Q9UN73 950 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 PCDHA8Q9Y5H6 950 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 LRRIQ4A6NIV6 560 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 DLATP10515 647 aaKnown RBP20.65■□□□□ 0.9
CSPG5-202ENST00000383738 MTMR2Q13614 643 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 GRM4Q14833 912 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 DPP9Q86TI2 863 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 CHP1Q99653 195 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 PCIF1Q9H4Z3 704 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 PLEKHG2Q9H7P9 1386 aa20.65■□□□□ 0.9
CSPG5-202ENST00000383738 IFNAR2P48551 515 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 TROAPQ12815 778 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 TUBB2AQ13885 445 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 METTL16Q86W50 562 aaKnown RBP20.64■□□□□ 0.9
CSPG5-202ENST00000383738 MRRFQ96E11 262 aaKnown RBP20.64■□□□□ 0.9
CSPG5-202ENST00000383738 PAGE5Q96GU1 130 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 TUBB2BQ9BVA1 445 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 IMPG2Q9BZV3 1241 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 DPH5Q9H2P9 285 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 NOD1Q9Y239 953 aa20.64■□□□□ 0.9
CSPG5-202ENST00000383738 E9PMD0 336 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 ANKS4BQ8N8V4 417 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 ENOX1Q8TC92 643 aaKnown RBP20.64■□□□□ 0.89
CSPG5-202ENST00000383738 TEKT3Q9BXF9 490 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 PPP1R12CQ9BZL4 782 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 NDUFA10O95299 355 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 CXCL9Q07325 125 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 KCTD2Q14681 263 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 GNPTABQ3T906 1256 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 ENGASEQ8NFI3 743 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 ZKSCAN4Q969J2 545 aaPredicted RBP20.64■□□□□ 0.89
CSPG5-202ENST00000383738 TRIM49BA6NDI0 452 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 K7ENM7 598 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 NNTQ13423 1086 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.89
CSPG5-202ENST00000383738 RNF169Q8NCN4 708 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 RMDN3Q96TC7 470 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 SMARCAL1Q9NZC9 954 aa20.64■□□□□ 0.89
CSPG5-202ENST00000383738 PEAK1Q9H792 1746 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 MFAP3LO75121 409 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 FOSP01100 380 aaPredicted RBP20.63■□□□□ 0.89
CSPG5-202ENST00000383738 MYZAPP0CAP1 466 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 RCSD1Q6JBY9 416 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 CCDC170Q8IYT3 715 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 AKT1S1Q96B36 256 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 DEFB129Q9H1M3 183 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.63■□□□□ 0.89
CSPG5-202ENST00000383738 NFAT5O94916 1531 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 RFX7Q2KHR2 1363 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 KRT19P08727 400 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 EHHADHQ08426 723 aa20.63■□□□□ 0.89
CSPG5-202ENST00000383738 TRIM68Q6AZZ1 485 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms