RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 HIBCHQ6NVY1 386 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 DNAJC24Q6P3W2 148 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 LRRC8AQ8IWT6 810 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 SUPT20HQ8NEM7 779 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFX3-204ENST00000382004 PRPSAP2O60256 369 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 AFPP02771 609 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 PDE6BP35913 854 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 ZBTB33Q86T24 672 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 TRIML1Q8N9V2 468 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PCIF1Q9H4Z3 704 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PPARGC1AQ9UBK2 798 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 ZNF212Q9UDV6 495 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 MAP3K5Q99683 1374 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 A0A0G2JND7 137 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PRR23D1E9PI22 279 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 PRR23D2P0DMB1 279 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 OSTNP61366 133 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 MXD4Q14582 209 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 TAF1BQ53T94 588 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 OR6B2Q6IFH4 312 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PHF21AQ96BD5 680 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 LRRC37BQ96QE4 947 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 HAUS4Q9H6D7 363 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 E7EWF7 191 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PJA2O43164 708 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 TMCC1O94876 653 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 ELF1P32519 619 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 GOLGA8FQ08AF8 430 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 GOLGA8DPQ0D2H9 430 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 ANGPT1Q15389 498 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 RNF219Q5W0B1 726 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 STX19Q8N4C7 294 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PYROXD1Q8WU10 500 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 TTC17Q96AE7 1141 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 EDEM3Q9BZQ6 932 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 ZWILCHQ9H900 591 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 AARSP49588 968 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFX3-204ENST00000382004 SLC7A5Q01650 507 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PPARAQ07869 468 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PPP2R5BQ15173 497 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 LPIN2Q92539 896 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 DHX38Q92620 1227 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 CLIC6Q96NY7 704 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 FBXL5Q9UKA1 691 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 NOS1P29475 1434 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 EIF4E1BA6NMX2 242 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 GYG2O15488 501 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 DDAH1O94760 285 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 HNRNPCP07910 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
RFX3-204ENST00000382004 STAT2P52630 851 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 UBXN2AP68543 259 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 KHDRBS2Q5VWX1 349 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 SCARA5Q6ZMJ2 495 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 SIX6OS1Q8N1H7 587 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 SYT2Q8N9I0 419 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 JRKLQ9Y4A0 524 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 MED7O43513 233 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 PAMP19021 973 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 CD58P19256 250 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 TRPC1P48995 793 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 GRIN1Q05586 938 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 NBPF10Q6P3W6 841 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 NEK8Q86SG6 692 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 TDRD7Q8NHU6 1098 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 KCNV2Q8TDN2 545 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 OTUD7AQ8TE49 926 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 AP5M1Q9H0R1 490 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 MID2Q9UJV3 735 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 KIAA1024Q9UPX6 916 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ATP8B3O60423 1300 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 CLIC2O15247 247 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 SERPINB2P05120 415 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 RANBP1P43487 201 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 SCNN1DP51172 638 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 COPB1P53618 953 aaKnown RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 EPHB4P54760 987 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 RRM2BQ7LG56 351 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 TBC1D1Q86TI0 1168 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 TRIM11Q96F44 468 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 TRIM45Q9H8W5 580 aaPredicted RBP6.31□□□□□ -1.4
RFX3-204ENST00000382004 RNF103-CHMP3A0A140T963 221 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 IQANK1A0A1B0GTG1 560 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 SUPT3HO75486 399 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 GFPT2O94808 682 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ACSL3O95573 720 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 FTCDO95954 541 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 ZBED1O96006 694 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 TMPRSS15P98073 1019 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 GPR162Q16538 588 aa6.31□□□□□ -1.4
RFX3-204ENST00000382004 CERKLQ49MI3 558 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms