RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ZNF569Q5MCW4 686 aa14□□□□□ -0.17
VPS16-202ENST00000380445 FAM83BQ5T0W9 1011 aa14□□□□□ -0.17
VPS16-202ENST00000380445 LENG9Q96B70 501 aa14□□□□□ -0.17
VPS16-202ENST00000380445 CHP1Q99653 195 aa14□□□□□ -0.17
VPS16-202ENST00000380445 MRPL11Q9Y3B7 192 aaKnown RBP14□□□□□ -0.17
VPS16-202ENST00000380445 CYP11B2P19099 503 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 CDK17Q00537 523 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
VPS16-202ENST00000380445 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 CATSPER3Q86XQ3 398 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 ACER1Q8TDN7 264 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 CEP63Q96MT8 703 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 P2RX7Q99572 595 aaKnown RBP13.99□□□□□ -0.17
VPS16-202ENST00000380445 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 RANBP17Q9H2T7 1088 aaKnown RBP13.99□□□□□ -0.17
VPS16-202ENST00000380445 HAUS4Q9H6D7 363 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 GCOM1H8Y6P7 765 aaPredicted RBP13.99□□□□□ -0.17
VPS16-202ENST00000380445 OPLAHO14841 1288 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 POLR2MP0CAP2 368 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 HOXA13P31271 388 aaPredicted RBP13.99□□□□□ -0.17
VPS16-202ENST00000380445 CAP2P40123 477 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 SLC12A3P55017 1021 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 PPP2R3AQ06190 1150 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 FBXO38Q6PIJ6 1188 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 ARGLU1Q9NWB6 273 aaPredicted RBP13.99□□□□□ -0.17
VPS16-202ENST00000380445 FEM1BQ9UK73 627 aa13.99□□□□□ -0.17
VPS16-202ENST00000380445 FRMD3A2A2Y4 597 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 MSH4O15457 936 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 TADA3O75528 432 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 ASNSP08243 561 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 STAT3P40763 770 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 TUBB4BP68371 445 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 LRRC41Q15345 812 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 ZNF662Q6ZS27 426 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 LRRC55Q6ZSA7 311 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 SYT2Q8N9I0 419 aaPredicted RBP13.98□□□□□ -0.17
VPS16-202ENST00000380445 POLR3CQ9BUI4 534 aaPredicted RBP13.98□□□□□ -0.17
VPS16-202ENST00000380445 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
VPS16-202ENST00000380445 AGPAT5Q9NUQ2 364 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 TRAF5O00463 557 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 CFBP00751 764 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 ZCWPW2Q504Y3 356 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 WDR59Q6PJI9 974 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 POTEGQ6S5H5 508 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 LRRN4CLQ8ND94 238 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 IRX2Q9BZI1 471 aaPredicted RBP13.98□□□□□ -0.17
VPS16-202ENST00000380445 PIM2Q9P1W9 311 aa13.98□□□□□ -0.17
VPS16-202ENST00000380445 TGFB2P61812 414 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 MAP3K10Q02779 954 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 KIF4BQ2VIQ3 1234 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 ARHGAP27Q6ZUM4 889 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 TMEM39BQ9GZU3 492 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 DDX41Q9UJV9 622 aaKnown RBP13.97□□□□□ -0.17
VPS16-202ENST00000380445 PCDHA2Q9Y5H9 948 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 H2AFXP16104 143 aaPredicted RBP13.97□□□□□ -0.17
VPS16-202ENST00000380445 CEP112Q8N8E3 955 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 JDP2Q8WYK2 163 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 UIMC1Q96RL1 719 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
VPS16-202ENST00000380445 RASSF10A6NK89 507 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 KRT86O43790 486 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 SPATA31C1P0DKV0 1188 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 HNRNPH3P31942 346 aaKnown RBP13.96□□□□□ -0.17
VPS16-202ENST00000380445 CXCL9Q07325 125 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 EDRF1Q3B7T1 1238 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 CCDC40Q4G0X9 1142 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 KIAA1755Q5JYT7 1200 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 CIAPIN1Q6FI81 312 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 ZBED3Q96IU2 234 aaPredicted RBP13.96□□□□□ -0.17
VPS16-202ENST00000380445 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
VPS16-202ENST00000380445 NHEJ1Q9H9Q4 299 aaPredicted RBP13.96□□□□□ -0.17
VPS16-202ENST00000380445 CDC23Q9UJX2 597 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 PLAGL2Q9UPG8 496 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 SIK3Q9Y2K2 1263 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 EIF3CLB5ME19 914 aaKnown RBP13.96□□□□□ -0.17
VPS16-202ENST00000380445 ARHGAP25P42331 645 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 ARSHQ5FYA8 562 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 CCDC174Q6PII3 467 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 MIGA2Q7L4E1 593 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 SLC35F6Q8N357 371 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 EIF3CQ99613 913 aaKnown RBP13.96□□□□□ -0.17
VPS16-202ENST00000380445 MMRN2Q9H8L6 949 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 VAV3Q9UKW4 847 aa13.96□□□□□ -0.17
VPS16-202ENST00000380445 COL4A5P29400 1685 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 WNT10BO00744 389 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 MUTP22033 750 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 KLK7P49862 253 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 MARSP56192 900 aaKnown RBP13.95□□□□□ -0.18
VPS16-202ENST00000380445 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 TNIP1Q15025 636 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 KIAA1328Q86T90 577 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms