RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 LRRC63Q05C16 580 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 SBK1Q52WX2 424 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 MICALL1Q8N3F8 863 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 BPIFA3Q9BQP9 254 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 AK9Q5TCS8 1911 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 SHPRHQ149N8 1683 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 DALRD3Q5D0E6 543 aaKnown RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 TMED8Q6PL24 325 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 ADGRA1Q86SQ6 560 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 SFR1Q86XK3 245 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 SMAP1Q8IYB5 467 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 DCPSQ96C86 337 aaKnown RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 PDE11AQ9HCR9 933 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 FAM184BQ9ULE4 1060 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 TTC26A0AVF1 554 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 GOLGA8IPA6NC78 632 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 GOLGA8JA6NMD2 632 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 LGALS16A8MUM7 142 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 FGFR2P21802 821 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 MESDQ14696 234 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 RCSD1Q6JBY9 416 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 FBXO38Q6PIJ6 1188 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 ENGASEQ8NFI3 743 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 UBE2Q2Q8WVN8 375 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 IRX2Q9BZI1 471 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-203ENST00000378169 VIMP08670 466 aaKnown RBP14.42□□□□□ -0.1
NPHP4-203ENST00000378169 CDAN1Q8IWY9 1227 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 ATP6V0A1Q93050 837 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 STMN4Q9H169 189 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-203ENST00000378169 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 GAP43P17677 238 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 SLC7A3Q8WY07 619 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 SLC4A9Q96Q91 983 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 KRT12Q99456 494 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 GABPB1Q06547 395 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-203ENST00000378169 SPP2Q13103 211 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 PSMD2Q13200 908 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 MTERF2Q49AM1 385 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 DPY19L2Q6NUT2 758 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 DCAF4Q8WV16 495 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 PARD6BQ9BYG5 372 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 EPC1Q9H2F5 836 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 TMEM60Q9H2L4 133 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 RAVER2Q9HCJ3 691 aaKnown RBP14.42□□□□□ -0.1
NPHP4-203ENST00000378169 AP3B2Q13367 1082 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
NPHP4-203ENST00000378169 MNAT1P51948 309 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 GPR162Q16538 588 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 SH2D3AQ9BRG2 576 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
NPHP4-203ENST00000378169 PDE6CP51160 858 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 PEX3P56589 373 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 FAM160B2Q86V87 743 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 CCDC63Q8NA47 563 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 CRAMP1Q96RY5 1269 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 PSMD1Q99460 953 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 SPZ1Q9BXG8 430 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 PIM2Q9P1W9 311 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 ATP1A2P50993 1020 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 CLCN6P51797 869 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 CEP85LQ5SZL2 805 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 BANK1Q8NDB2 785 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 NSRP1Q9H0G5 558 aaKnown RBP14.41□□□□□ -0.1
NPHP4-203ENST00000378169 NOD1Q9Y239 953 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
NPHP4-203ENST00000378169 SRGAP2O75044 1071 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 ZNF543Q08ER8 600 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 COASYQ13057 564 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 PPFIA1Q13136 1202 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 CDC42EP5Q6NZY7 148 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 CCDC121Q6ZUS5 278 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 RAD54LQ92698 747 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 TRIM9Q9C026 710 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 INO80B-WBP1J3KQ70 363 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 N4BP1O75113 896 aaKnown RBP14.4□□□□□ -0.1
NPHP4-203ENST00000378169 CTNNA1P35221 906 aaKnown RBP14.4□□□□□ -0.1
NPHP4-203ENST00000378169 CCDC170Q8IYT3 715 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 NT5C1BQ96P26 610 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 INO80BQ9C086 356 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-203ENST00000378169 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 USP14P54578 494 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 ZBTB16Q05516 673 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 C2orf54Q08AI8 447 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 PHLDB2Q86SQ0 1253 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 UBE2TQ9NPD8 197 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-203ENST00000378169 PCDHA13Q9Y5I0 950 aa14.4□□□□□ -0.1
NPHP4-203ENST00000378169 TMEM191BP0C7N4 346 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 FERP16591 822 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 MXI1P50539 228 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 KCTD2Q14681 263 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 BRDTQ58F21 947 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-203ENST00000378169 KCTD16Q68DU8 428 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 ALKBH5Q6P6C2 394 aaKnown RBP14.39□□□□□ -0.11
NPHP4-203ENST00000378169 TAB3Q8N5C8 712 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-203ENST00000378169 ANKS4BQ8N8V4 417 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 TUBE1Q9UJT0 475 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms