RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PCGF5Q86SE9 256 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 DAB2P98082 770 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 FAM117BQ6P1L5 589 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 CHAMP1Q96JM3 812 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 ATG3Q9NT62 314 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 XPOTO43592 962 aaKnown RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 FTCDO95954 541 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 NUDCD1Q96RS6 583 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 ZNF215Q9UL58 517 aaPredicted RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 ATP8A1Q9Y2Q0 1164 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 ZBTB7BO15156 539 aaPredicted RBP17.64■□□□□ 0.42
RGP1-201ENST00000378078 ZSCAN9O15535 394 aaPredicted RBP17.64■□□□□ 0.42
RGP1-201ENST00000378078 UPP2O95045 317 aa17.64■□□□□ 0.42
RGP1-201ENST00000378078 PHKA1P46020 1223 aa17.64■□□□□ 0.42
RGP1-201ENST00000378078 C11orf74Q86VG3 221 aa17.64■□□□□ 0.42
RGP1-201ENST00000378078 MECOMQ03112 1051 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 GLE1Q53GS7 698 aaKnown RBP17.64■□□□□ 0.41
RGP1-201ENST00000378078 ZC3H12BQ5HYM0 836 aaKnown RBP17.64■□□□□ 0.41
RGP1-201ENST00000378078 PIGSQ96S52 555 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 DAAM1Q9Y4D1 1078 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 ATP8B3O60423 1300 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 TMED1Q13445 227 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 SH3KBP1Q96B97 665 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 AP1M1Q9BXS5 423 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 FANCLQ9NW38 375 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 HYOU1Q9Y4L1 999 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
RGP1-201ENST00000378078 ZMYM6O95789 1325 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 BTBD18B2RXH4 712 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 MYO1FO00160 1098 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 PRPSAP2O60256 369 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 MAP3K21Q5TCX8 1036 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 NR2F2P24468 414 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 NUMBP49757 651 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 CAPN11Q9UMQ6 739 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 LBRQ14739 615 aaKnown RBP17.64■□□□□ 0.41
RGP1-201ENST00000378078 IMPG1Q17R60 797 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 SLAIN2Q9P270 581 aa17.64■□□□□ 0.41
RGP1-201ENST00000378078 MYO1EQ12965 1108 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 PPP6R3Q5H9R7 873 aaPredicted RBP17.63■□□□□ 0.41
RGP1-201ENST00000378078 KRT26Q7Z3Y9 468 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 NOSTRINQ8IVI9 506 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 GLYCTKQ8IVS8 523 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 EPS15L1Q9UBC2 864 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 RFWD2Q8NHY2 731 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 TEKT4Q8WW24 435 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 PBXIP1Q96AQ6 731 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 GINM1Q9NU53 330 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 PASKQ96RG2 1323 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 GCKP35557 465 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 DALRD3Q5D0E6 543 aaKnown RBP17.63■□□□□ 0.41
RGP1-201ENST00000378078 DNAJC24Q6P3W2 148 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 SYCP2Q9BX26 1530 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 IRF1P10914 325 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 SYCP2LQ5T4T6 812 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 FANCBQ8NB91 859 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 EDEM3Q9BZQ6 932 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 Q9H521 79 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 KRT10P13645 584 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 PLTPP55058 493 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 ABHD8Q96I13 439 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 TSPOAP1O95153 1857 aa17.63■□□□□ 0.41
RGP1-201ENST00000378078 AGRPO00253 132 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 SEC31AO94979 1220 aaKnown RBP17.62■□□□□ 0.41
RGP1-201ENST00000378078 ZBTB7AO95365 584 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 PSMC5P62195 406 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 CCDC84Q86UT8 332 aaPredicted RBP17.62■□□□□ 0.41
RGP1-201ENST00000378078 TAGAPQ8N103 731 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 TRIM58Q8NG06 486 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 GCNT4Q9P109 453 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 USP17L8P0C7I0 530 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 BTN2A2Q8WVV5 523 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ACCSQ96QU6 501 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 GTPBP10A4D1E9 387 aaKnown RBP17.62■□□□□ 0.41
RGP1-201ENST00000378078 UBE3AQ05086 875 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ANKRD20A4Q4UJ75 823 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ANKRD20A8PQ5CZ79 823 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ANKRD20A2Q5SQ80 823 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ANKRD20A1Q5TYW2 823 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 CAPS2Q9BXY5 557 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 TUBB4AP04350 444 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 CAPN10Q9HC96 672 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 USP17L3A6NCW0 530 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 USP17L4A6NCW7 530 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 MOCS2O96007 188 aaPredicted RBP17.62■□□□□ 0.41
RGP1-201ENST00000378078 GSPT1P15170 499 aaKnown RBP17.62■□□□□ 0.41
RGP1-201ENST00000378078 E2F5Q15329 346 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 USP17L1Q7RTZ2 530 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 CERS3Q8IU89 383 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 TTLL1O95922 423 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 PSMC2P35998 433 aaKnown RBP17.62■□□□□ 0.41
RGP1-201ENST00000378078 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms