RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PLAAQ9Y263 795 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 ATP6V0A2Q9Y487 856 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 ACTN1P12814 892 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 FXR2P51116 673 aaKnown RBP eCLIP19.81■□□□□ 0.76
GNE-201ENST00000377902 ZCWPW2Q504Y3 356 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 CEP85LQ5SZL2 805 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 SUGP1Q8IWZ8 645 aaKnown RBP19.81■□□□□ 0.76
GNE-201ENST00000377902 DNAJC19Q96DA6 116 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 ROBO3Q96MS0 1386 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 TNNI2P48788 182 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 HDLBPQ00341 1268 aaKnown RBP19.81■□□□□ 0.76
GNE-201ENST00000377902 FKBP3Q00688 224 aaKnown RBP19.81■□□□□ 0.76
GNE-201ENST00000377902 KRT79Q5XKE5 535 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
GNE-201ENST00000377902 ANKIB1Q9P2G1 1089 aa19.81■□□□□ 0.76
GNE-201ENST00000377902 SNED1Q8TER0 1413 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 KCNK3O14649 394 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 CDC37Q16543 378 aaPredicted RBP19.8■□□□□ 0.76
GNE-201ENST00000377902 SLC18A3Q16572 532 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 TMEM266Q2M3C6 531 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 OTUD6BQ8N6M0 293 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 AP1M1Q9BXS5 423 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 ANKRD2Q9GZV1 360 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 EPN3Q9H201 632 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 PANK4Q9NVE7 773 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 ABCB11O95342 1321 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 IRS2Q9Y4H2 1338 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 ERVK-9P63128 1117 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 KLHL30Q0D2K2 578 aa19.8■□□□□ 0.76
GNE-201ENST00000377902 HLTFQ14527 1009 aaKnown RBP eCLIP19.8■□□□□ 0.76
GNE-201ENST00000377902 NBPF5PQ86XG9 351 aaPredicted RBP19.8■□□□□ 0.76
GNE-201ENST00000377902 ZNF473Q8WTR7 871 aaKnown RBP19.8■□□□□ 0.76
GNE-201ENST00000377902 E9PMD0 336 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 MNAT1P51948 309 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 IRX3P78415 501 aaPredicted RBP19.79■□□□□ 0.76
GNE-201ENST00000377902 SLC10A5Q5PT55 438 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 MCTP2Q6DN12 878 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
GNE-201ENST00000377902 USP38Q8NB14 1042 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 ATP6V1G3Q96LB4 118 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 PPANQ9NQ55 473 aaKnown RBP19.79■□□□□ 0.76
GNE-201ENST00000377902 TSKSQ9UJT2 592 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 PCDHGC5Q9Y5F6 944 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 MEFVO15553 781 aaPredicted RBP19.79■□□□□ 0.76
GNE-201ENST00000377902 PPP1R37O75864 691 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 BAG3O95817 575 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 FNTAP49354 379 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 PTGISQ16647 500 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 CCT8L2Q96SF2 557 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 GPCPD1Q9NPB8 672 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 RIC8AQ9NPQ8 531 aa19.79■□□□□ 0.76
GNE-201ENST00000377902 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.79■□□□□ 0.76
GNE-201ENST00000377902 BACH1O14867 736 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 TM4SF1P30408 202 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 ITGB3BPQ13352 177 aaPredicted RBP19.78■□□□□ 0.76
GNE-201ENST00000377902 NFIXQ14938 502 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 TMEM119Q4V9L6 283 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 FAM26FQ5R3K3 315 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 B4GALNT4Q76KP1 1039 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 HAS1Q92839 578 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 NEUROG2Q9H2A3 272 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 ECHS1P30084 290 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 FLT3P36888 993 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 MDH1P40925 334 aaKnown RBP19.78■□□□□ 0.76
GNE-201ENST00000377902 BTDP43251 543 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 RNF187Q5TA31 235 aaPredicted RBP19.78■□□□□ 0.76
GNE-201ENST00000377902 NEDD1Q8NHV4 660 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 RNF14Q9UBS8 474 aa19.78■□□□□ 0.76
GNE-201ENST00000377902 E7EVH7 732 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 H0YHG0 523 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 KIAA0754O94854 1291 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 ADCY7P51828 1080 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 PTK2Q05397 1052 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 MYCBPAPQ8TBZ2 947 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 RTFDC1Q9BY42 306 aaPredicted RBP19.77■□□□□ 0.76
GNE-201ENST00000377902 EDEM3Q9BZQ6 932 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 ZHX3Q9H4I2 956 aa19.77■□□□□ 0.76
GNE-201ENST00000377902 PDHBP11177 359 aa19.77■□□□□ 0.75
GNE-201ENST00000377902 HSD17B3P37058 310 aa19.77■□□□□ 0.75
GNE-201ENST00000377902 C16orf86Q6ZW13 317 aa19.77■□□□□ 0.75
GNE-201ENST00000377902 NLRP14Q86W24 1093 aa19.77■□□□□ 0.75
GNE-201ENST00000377902 MREGQ8N565 214 aa19.77■□□□□ 0.75
GNE-201ENST00000377902 SETDB2Q96T68 719 aa19.77■□□□□ 0.75
GNE-201ENST00000377902 CEP104O60308 925 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 SLC9A1P19634 815 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 IFT88Q13099 833 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 UAP1Q16222 522 aaPredicted RBP19.76■□□□□ 0.75
GNE-201ENST00000377902 PTF1AQ7RTS3 328 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 TRIM59Q8IWR1 403 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 CNPY4Q8N129 248 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 PRPF38AQ8NAV1 312 aaKnown RBP19.76■□□□□ 0.75
GNE-201ENST00000377902 LRRC4CQ9HCJ2 640 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 BCCIPQ9P287 314 aaKnown RBP eCLIP19.76■□□□□ 0.75
GNE-201ENST00000377902 TMOD1P28289 359 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 PSMD2Q13200 908 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 PDIA5Q14554 519 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 ZNF571Q7Z3V5 609 aaPredicted RBP19.76■□□□□ 0.75
GNE-201ENST00000377902 CD302Q8IX05 232 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 PROM2Q8N271 834 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 WDR66Q8TBY9 1149 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms