RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PLTPP55058 493 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 GRM4Q14833 912 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 HIBCHQ6NVY1 386 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-202ENST00000377865 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 RHOT2Q8IXI1 618 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 FAM81BQ96LP2 452 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 PPP1R12CQ9BZL4 782 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 RAB20Q9NX57 234 aa9.54□□□□□ -0.88
PCDH9-202ENST00000377865 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 FAM187AA6NFU0 413 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ZRANB2O95218 330 aaKnown RBP eCLIP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ADAMTS2O95450 1211 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 MMEP08473 750 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 EIF6P56537 245 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 GFPT1Q06210 699 aaPredicted RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 TBX2Q13207 712 aaPredicted RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 LRRC1Q9BTT6 524 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 L1RE1Q9UN81 338 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 SSU72P8A0A1W2PR75 194 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 PPP1R3GB7ZBB8 358 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 RHOBTB3O94955 611 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 RPSAP08865 295 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 CYP2J2P51589 502 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 LRRC41Q15345 812 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 GPATCH4Q5T3I0 446 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 MAP3K21Q5TCX8 1036 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 GUF1Q8N442 669 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 MPHOSPH6Q99547 160 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ZC3H12CQ9C0D7 883 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 GCNT4Q9P109 453 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 RABGAP1Q9Y3P9 1069 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ORC4O43929 436 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 TRIM28Q13263 835 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 FAM133BQ5BKY9 247 aaKnown RBP9.53□□□□□ -0.88
PCDH9-202ENST00000377865 TRIM68Q6AZZ1 485 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 BCAP29Q9UHQ4 241 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 SALL1Q9NSC2 1324 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ANKRD65E5RJM6 399 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 MFAP3P55082 362 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 PPARDQ03181 441 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 FAM186BQ8IYM0 893 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 DNAJC7Q99615 494 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 SLC26A4O43511 780 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 CDC25AP30304 524 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 GUCY1A2P33402 732 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 AP1M1Q9BXS5 423 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 ANKZF1Q9H8Y5 726 aa9.53□□□□□ -0.88
PCDH9-202ENST00000377865 BTDP43251 543 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 IRAK1P51617 712 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 PRR16Q569H4 304 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 SH2D4BQ5SQS7 431 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 NAA35Q5VZE5 725 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.88
PCDH9-202ENST00000377865 ALKBH5Q6P6C2 394 aaKnown RBP9.52□□□□□ -0.88
PCDH9-202ENST00000377865 CHMP6Q96FZ7 201 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 TXNDC16Q9P2K2 825 aa9.52□□□□□ -0.88
PCDH9-202ENST00000377865 PLA2G4BP0C869 781 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 TAF11Q15544 211 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 KDM7AQ6ZMT4 941 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 KIFC2Q96AC6 838 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 CHP1Q99653 195 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 TRIM4Q9C037 500 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 ZNF804BA4D1E1 1349 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 GGPS1O95749 300 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 PRLRP16471 622 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 IFNAR2P48551 515 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 PAPD7Q5XG87 772 aaKnown RBP9.52□□□□□ -0.89
PCDH9-202ENST00000377865 TPH2Q8IWU9 490 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 FAM178BQ8IXR5 827 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 C7orf25Q9BPX7 421 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 H3BQF6 201 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 NCK2O43639 380 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 GAS7O60861 476 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 NOL3O60936 208 aaKnown RBP9.52□□□□□ -0.89
PCDH9-202ENST00000377865 PDE6BP35913 854 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 PMS2P54278 862 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 CDK17Q00537 523 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 PTPROQ16827 1216 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 NT5DC1Q5TFE4 455 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 CCDC89Q8N998 374 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 CFAP57Q96MR6 1250 aa9.52□□□□□ -0.89
PCDH9-202ENST00000377865 CYP27B1O15528 508 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ZNF18P17022 549 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 CAV1Q03135 178 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ADAT2Q7Z6V5 191 aaKnown RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 MORC4Q8TE76 937 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 EEF2KMTQ96G04 330 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 PIGSQ96S52 555 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 COL15A1P39059 1388 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 FRMD3A2A2Y4 597 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 DCTN3O75935 186 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 MAGOHP61326 146 aaKnown RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 DHX34Q14147 1143 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms