RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 POLR3CQ9BUI4 534 aaPredicted RBP18.72■□□□□ 0.59
HLA-A-202ENST00000376806 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
HLA-A-202ENST00000376806 FZD1Q9UP38 647 aa18.72■□□□□ 0.59
HLA-A-202ENST00000376806 RABGAP1Q9Y3P9 1069 aa18.72■□□□□ 0.59
HLA-A-202ENST00000376806 PSMD10O75832 226 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 TPM2P07951 284 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 ALAS1P13196 640 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 MCF2L2Q86YR7 1114 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 CCDC65Q8IXS2 484 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 PPP1R13BQ96KQ4 1090 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 CNOT6LQ96LI5 555 aaKnown RBP18.71■□□□□ 0.59
HLA-A-202ENST00000376806 EIF2AK1Q9BQI3 630 aaKnown RBP18.71■□□□□ 0.59
HLA-A-202ENST00000376806 COL20A1Q9P218 1284 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 PITPNM2Q9BZ72 1349 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 EML1O00423 815 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 STX10O60499 249 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 MFAP3LO75121 409 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 RBL2Q08999 1139 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 PPP2R5CQ13362 524 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 FAM26FQ5R3K3 315 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 PANX2Q96RD6 677 aa18.71■□□□□ 0.59
HLA-A-202ENST00000376806 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.71■□□□□ 0.59
HLA-A-202ENST00000376806 MEIS1O00470 390 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 GYPCP04921 128 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 PSMC6P62333 389 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 CYP4A11Q02928 519 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 UBXN1Q04323 297 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 TRIM14Q14142 442 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 GLIS3Q8NEA6 775 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 KLRG1Q96E93 195 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 C12orf42Q96LP6 360 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 PNMA2Q9UL42 364 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 DNM3Q9UQ16 869 aa18.7■□□□□ 0.58
HLA-A-202ENST00000376806 CTDP1Q9Y5B0 961 aaPredicted RBP18.7■□□□□ 0.58
HLA-A-202ENST00000376806 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 UQCRHLA0A096LP55 91 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 NPHP3-ACAD11A0A0J9YXS1 232 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 FRMD3A2A2Y4 597 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 CCP110O43303 1012 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 ZBED4O75132 1171 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 UQCRHP07919 91 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 FDX1P10109 184 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 LRRC63Q05C16 580 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 PABPC4Q13310 644 aaKnown RBP eCLIP18.69■□□□□ 0.58
HLA-A-202ENST00000376806 ARSHQ5FYA8 562 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 MUM1L1Q5H9M0 696 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 NOL9Q5SY16 702 aaKnown RBP18.69■□□□□ 0.58
HLA-A-202ENST00000376806 FOXR2Q6PJQ5 311 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 OTOP1Q7RTM1 612 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 SYT2Q8N9I0 419 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-202ENST00000376806 L3MBTL3Q96JM7 780 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-202ENST00000376806 HOMER2Q9NSB8 354 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 GAS7O60861 476 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 KRT18P05783 430 aaKnown RBP18.69■□□□□ 0.58
HLA-A-202ENST00000376806 TPM1P09493 284 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 ARP10275 920 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 CACNB1Q02641 598 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-202ENST00000376806 LRRC41Q15345 812 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 SLC30A10Q6XR72 485 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 CNGA4Q8IV77 575 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 MYOCDQ8IZQ8 938 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 KCTD17Q8N5Z5 321 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 SAMD3Q8N6K7 520 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 MYRIPQ8NFW9 859 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 ZNF507Q8TCN5 953 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 ATG4CQ96DT6 458 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 TUBGCP2Q9BSJ2 902 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 PCDHA2Q9Y5H9 948 aa18.69■□□□□ 0.58
HLA-A-202ENST00000376806 A0A1W2PQC6 194 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 VWA5AO00534 786 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 CHMP2AO43633 222 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 PRKCSHP14314 528 aaPredicted RBP18.68■□□□□ 0.58
HLA-A-202ENST00000376806 CASP14P31944 242 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 HMGCS2P54868 508 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 KRT26Q7Z3Y9 468 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 MB21D1Q8N884 522 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 CPLX3Q8WVH0 158 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 CCDC51Q96ER9 411 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 ZFP91Q96JP5 570 aaPredicted RBP18.68■□□□□ 0.58
HLA-A-202ENST00000376806 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 MAP3K20Q9NYL2 800 aaKnown RBP18.68■□□□□ 0.58
HLA-A-202ENST00000376806 ZHX2Q9Y6X8 837 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 MYH11P35749 1972 aa18.68■□□□□ 0.58
HLA-A-202ENST00000376806 EYA4O95677 639 aa18.67■□□□□ 0.58
HLA-A-202ENST00000376806 MTIF2P46199 727 aaKnown RBP18.67■□□□□ 0.58
HLA-A-202ENST00000376806 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
HLA-A-202ENST00000376806 RAD51AP2Q09MP3 1159 aa18.67■□□□□ 0.58
HLA-A-202ENST00000376806 SYTL5Q8TDW5 730 aaPredicted RBP18.67■□□□□ 0.58
HLA-A-202ENST00000376806 EEF2KMTQ96G04 330 aa18.67■□□□□ 0.58
HLA-A-202ENST00000376806 WNK4Q96J92 1243 aa18.67■□□□□ 0.58
HLA-A-202ENST00000376806 TSG101Q99816 390 aa18.67■□□□□ 0.58
HLA-A-202ENST00000376806 TEKT3Q9BXF9 490 aa18.67■□□□□ 0.58
HLA-A-202ENST00000376806 NAA15Q9BXJ9 866 aaKnown RBP18.67■□□□□ 0.58
HLA-A-202ENST00000376806 FGFBP2Q9BYJ0 223 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms