RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 AGBL1Q96MI9 1066 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
DDR1-227ENST00000376570 K7ENM7 598 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 PCP11498 1178 aaKnown RBP12.85□□□□□ -0.35
DDR1-227ENST00000376570 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 EPHB6O15197 1021 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 SRGNP10124 158 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 MYBP10242 640 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
DDR1-227ENST00000376570 NF2P35240 595 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 STAT2P52630 851 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 KIF11P52732 1056 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 BIRC3Q13489 604 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 BPIFA3Q9BQP9 254 aa12.85□□□□□ -0.35
DDR1-227ENST00000376570 SOX10P56693 466 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 SPP2Q13103 211 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 GRB10Q13322 594 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 NPY5RQ15761 445 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 NAALADL2Q58DX5 795 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
DDR1-227ENST00000376570 ARL6IP4Q66PJ3 421 aaKnown RBP12.84□□□□□ -0.35
DDR1-227ENST00000376570 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 CCDC50Q8IVM0 306 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 KIFC3Q9BVG8 833 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
DDR1-227ENST00000376570 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
DDR1-227ENST00000376570 SLC9A1P19634 815 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 VSNL1P62760 191 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 XKR9Q5GH70 373 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 PPM1KQ8N3J5 372 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 MMS19Q96T76 1030 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 DNAJC17Q9NVM6 304 aaKnown RBP12.84□□□□□ -0.35
DDR1-227ENST00000376570 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 PSMD14O00487 310 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 ADCY1Q08828 1119 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 RASSF4Q9H2L5 321 aa12.84□□□□□ -0.35
DDR1-227ENST00000376570 SHMT1P34896 483 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 OSTNP61366 133 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 RAD54LQ92698 747 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 ZMYND12Q9H0C1 365 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 EFCAB8A8MWE9 144 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 MED24O75448 989 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 ECM1Q16610 540 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 C8orf74Q6P047 294 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 KRT12Q99456 494 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 ZNF446Q9NWS9 450 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 MARK3P27448 753 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 COPB2P35606 906 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 CASP4P49662 377 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 FKBP3Q00688 224 aaKnown RBP12.83□□□□□ -0.36
DDR1-227ENST00000376570 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 KIAA0895Q8NCT3 520 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 CNKSR1Q969H4 720 aa12.83□□□□□ -0.36
DDR1-227ENST00000376570 BAZ2AQ9UIF9 1905 aaKnown RBP12.83□□□□□ -0.36
DDR1-227ENST00000376570 TISP43B9A030 160 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 ZNF18P17022 549 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 GUCY2DQ02846 1103 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 ZNF211Q13398 564 aaPredicted RBP12.82□□□□□ -0.36
DDR1-227ENST00000376570 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
DDR1-227ENST00000376570 TRIM65Q6PJ69 517 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 CYFIP1Q7L576 1253 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 CAPN12Q6ZSI9 719 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 CERKQ8TCT0 537 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 SAAL1Q96ER3 474 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 FRMD4BQ9Y2L6 1034 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 TADA3O75528 432 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 EXOC3L4Q17RC7 722 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 DHTKD1Q96HY7 919 aaPredicted RBP12.82□□□□□ -0.36
DDR1-227ENST00000376570 PNKPQ96T60 521 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 PCDHA13Q9Y5I0 950 aa12.82□□□□□ -0.36
DDR1-227ENST00000376570 PPP1R11O60927 126 aaPredicted RBP12.81□□□□□ -0.36
DDR1-227ENST00000376570 CALCAP01258 141 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 GCLMP48507 274 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
DDR1-227ENST00000376570 KCNH2Q12809 1159 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms