RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 USP32Q8NFA0 1604 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 MCF2P10911 925 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 SATB1Q01826 763 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 MAP3K10Q02779 954 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 SYT2Q8N9I0 419 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 FRMD8Q9BZ67 464 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 ROPN1BQ9BZX4 212 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 ROPN1Q9HAT0 212 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 A0A1W2PQJ5 194 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 GOLGA8TH3BQL2 631 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 PSMD14O00487 310 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 FOXO3O43524 673 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 GOLGA8HP0CJ92 632 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 PRPSAP1Q14558 356 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 EP400NLQ6ZTU2 488 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 KIAA1586Q9HCI6 787 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 ZNF608Q9ULD9 1512 aaPredicted RBP11□□□□□ -0.65
PTCH1-204ENST00000375290 GCP02774 474 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 ACADSP16219 412 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 KCNA4P22459 653 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 MAD1L1Q9Y6D9 718 aa11□□□□□ -0.65
PTCH1-204ENST00000375290 CPA1P15085 419 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ILF2Q12905 390 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 TRADDQ15628 312 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 GRAMD4Q6IC98 578 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ENOSF1Q7L5Y1 443 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 FGD4Q96M96 766 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 KCND1Q9NSA2 647 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ZNF148Q9UQR1 794 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ZHX2Q9Y6X8 837 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 CNPY3Q9BT09 278 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 A0A1B0GW55 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 GPC4O75487 556 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4L2P0CJ85 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4L3P0CJ86 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4L4P0CJ87 422 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4L5P0CJ88 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4L6P0CJ89 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4L7P0CJ90 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 PRLRP16471 622 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 SUCLG2Q96I99 432 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 DUX4Q9UBX2 424 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 TNNQ9UQP3 1299 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 SPAG6O75602 509 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ATP5BP06576 529 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 RBM17Q96I25 401 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 NT5C1BQ96P26 610 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 NRBP1Q9UHY1 535 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 TRIM50Q86XT4 487 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 EAF2Q96CJ1 260 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 STRIP2Q9ULQ0 834 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 GAS7O60861 476 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 PTPREP23469 700 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ARHGDIAP52565 204 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 TAP1Q03518 808 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 NUGGCQ68CJ6 796 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 MB21D1Q8N884 522 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 SYN2Q92777 582 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ARL2BPQ9Y2Y0 163 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ELF1P32519 619 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 PTH1RQ03431 593 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ZBTB38Q8NAP3 1195 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 GIPC2Q8TF65 315 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 PPWD1Q96BP3 646 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 STAT4Q14765 748 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 CXorf56Q9H5V9 222 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 SEL1LQ9UBV2 794 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 GGA2Q9UJY4 613 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ADGRG1Q9Y653 693 aa10.99□□□□□ -0.65
PTCH1-204ENST00000375290 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
PTCH1-204ENST00000375290 CUL3Q13618 768 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 ICA1LQ8NDH6 482 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 MADDQ8WXG6 1647 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 BAG2O95816 211 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 HECW2Q9P2P5 1572 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 CYP21A2P08686 494 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 AP1B1Q10567 949 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 PSMB7Q99436 277 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 HSPA9P38646 679 aaKnown RBP10.98□□□□□ -0.65
PTCH1-204ENST00000375290 CASC4Q6P4E1 433 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 PLAAQ9Y263 795 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 NEURL4Q96JN8 1562 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SOWAHDA6NJG2 315 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 BTBD18B2RXH4 712 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 CDH16O75309 829 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 INPP1P49441 399 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-204ENST00000375290 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 CLIC4Q9Y696 253 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms