RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZNF609O15014 1411 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 TULP4Q9NRJ4 1543 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 ABCB5Q2M3G0 1257 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 TUBE1Q9UJT0 475 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 SETD1BQ9UPS6 1966 aaKnown RBP12.53□□□□□ -0.4
PTCH1-203ENST00000375274 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 MAPK4P31152 587 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 DR1Q01658 176 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 DMP1Q13316 513 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-203ENST00000375274 ARHGEF18Q6ZSZ5 1173 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 H0YCG3 227 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 PEX19P40855 299 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 UBE2SQ16763 222 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 CFAP61Q8NHU2 1237 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 GBP5Q96PP8 586 aa12.53□□□□□ -0.4
PTCH1-203ENST00000375274 FBXO2Q9UK22 296 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-203ENST00000375274 HNRNPDLO14979 420 aaKnown RBP12.52□□□□□ -0.4
PTCH1-203ENST00000375274 FGGP02679 453 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.4
PTCH1-203ENST00000375274 FOXO4P98177 505 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 SNX1Q13596 522 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 ICE2Q659A1 982 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
PTCH1-203ENST00000375274 A0A1B0GTH6 734 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 A0A1W2PQC6 194 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 PRPF6O94906 941 aaKnown RBP12.52□□□□□ -0.41
PTCH1-203ENST00000375274 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-203ENST00000375274 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 TAB3Q8N5C8 712 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-203ENST00000375274 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 NACC1Q96RE7 527 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 ALKQ9UM73 1620 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 RNF8O76064 485 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.41
PTCH1-203ENST00000375274 PARVGQ9HBI0 331 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 BSDC1Q9NW68 430 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-203ENST00000375274 CEP72Q9P209 647 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 EVI5O60447 810 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
PTCH1-203ENST00000375274 GUCY2CP25092 1073 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 CDK8P49336 464 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 FMR1Q06787 632 aaKnown RBP eCLIP12.52□□□□□ -0.412e-7■■■■■ 26.8
PTCH1-203ENST00000375274 TXNRD1Q16881 649 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 PROM2Q8N271 834 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 BHMT2Q9H2M3 363 aa12.52□□□□□ -0.41
PTCH1-203ENST00000375274 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 FRMD3A2A2Y4 597 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 POTEMA6NI47 508 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 CYP2D6P10635 497 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 PRDX5P30044 214 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 CYP2C19P33261 490 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 MXI1P50539 228 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 UBXN2AP68543 259 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 ATP2C1P98194 919 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-203ENST00000375274 GLG1Q92896 1179 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 BAG2O95816 211 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 ATP1A1P05023 1023 aaKnown RBP12.51□□□□□ -0.41
PTCH1-203ENST00000375274 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 ZNF577Q9BSK1 485 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-203ENST00000375274 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 NRKQ7Z2Y5 1582 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-203ENST00000375274 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 GMNNO75496 209 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 GFPT1Q06210 699 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-203ENST00000375274 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 SCYL2Q6P3W7 929 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 RNF34Q969K3 372 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 TBK1Q9UHD2 729 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 ADGRB3O60242 1522 aa12.51□□□□□ -0.41
PTCH1-203ENST00000375274 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 STAM2O75886 525 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 C6orf118Q5T5N4 469 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 CHP1Q99653 195 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TMEM47Q9BQJ4 181 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms