RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 REXO1L1PQ8IX06 675 aa17.39■□□□□ 0.37
CCDC40-202ENST00000374876 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
CCDC40-202ENST00000374876 EFCC1Q9HA90 598 aa17.39■□□□□ 0.37
CCDC40-202ENST00000374876 VAT1LQ9HCJ6 419 aa17.39■□□□□ 0.37
CCDC40-202ENST00000374876 DNAI1Q9UI46 699 aa17.39■□□□□ 0.37
CCDC40-202ENST00000374876 PHLPP2Q6ZVD8 1323 aa17.39■□□□□ 0.37
CCDC40-202ENST00000374876 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 PLA2G6O60733 806 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 NONOQ15233 471 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 BTNL9Q6UXG8 535 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 MB21D1Q8N884 522 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 L2HGDHQ9H9P8 463 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 RAVER2Q9HCJ3 691 aaKnown RBP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 ZBED4O75132 1171 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 ANKRD20A12PQ8NF67 263 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 NELFBQ8WX92 580 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 PANX2Q96RD6 677 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 PIGSQ96S52 555 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 MOV10L1Q9BXT6 1211 aaKnown RBP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 SLC38A10Q9HBR0 1119 aa17.38■□□□□ 0.37
CCDC40-202ENST00000374876 CGNQ9P2M7 1197 aaKnown RBP17.38■□□□□ 0.37
CCDC40-202ENST00000374876 CCNT1O60563 726 aaKnown RBP17.37■□□□□ 0.37
CCDC40-202ENST00000374876 COBLO75128 1261 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 STAT3P40763 770 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 SPAG1Q07617 926 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 LETM2Q2VYF4 491 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 ASPRV1Q53RT3 343 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 COL13A1Q5TAT6 717 aaPredicted RBP17.37■□□□□ 0.37
CCDC40-202ENST00000374876 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 CCDC174Q6PII3 467 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 CCSER1Q9C0I3 900 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 ZNF214Q9UL59 606 aaPredicted RBP17.37■□□□□ 0.37
CCDC40-202ENST00000374876 TRIM17Q9Y577 477 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 MYL1P05976 194 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 OR52Z1P0C646 297 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 TRIM65Q6PJ69 517 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 AK8Q96MA6 479 aa17.37■□□□□ 0.37
CCDC40-202ENST00000374876 DOCK3Q8IZD9 2030 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 CCT6AP40227 531 aaKnown RBP17.36■□□□□ 0.37
CCDC40-202ENST00000374876 PBX1P40424 430 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 FCGRTP55899 365 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 RBL2Q08999 1139 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 TOGARAM2Q6ZUX3 1019 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 OTOP1Q7RTM1 612 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 NEK8Q86SG6 692 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 NCAPG2Q86XI2 1143 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 ADGRF4Q8IZF3 695 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 AGBL1Q96MI9 1066 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC40-202ENST00000374876 LIMA1Q9UHB6 759 aaKnown RBP17.36■□□□□ 0.37
CCDC40-202ENST00000374876 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 RIPK3Q9Y572 518 aa17.36■□□□□ 0.37
CCDC40-202ENST00000374876 V9GYY5 206 aaPredicted RBP17.36■□□□□ 0.37
CCDC40-202ENST00000374876 TNPO2O14787 897 aaKnown RBP17.35■□□□□ 0.37
CCDC40-202ENST00000374876 N4BP3O15049 544 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 TPM1P09493 284 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 TAL1P17542 331 aaPredicted RBP17.35■□□□□ 0.37
CCDC40-202ENST00000374876 ERCC3P19447 782 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 PRCPP42785 496 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 CCNA1P78396 465 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 KRT31Q15323 416 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 SNRNP48Q6IEG0 339 aaKnown RBP17.35■□□□□ 0.37
CCDC40-202ENST00000374876 REXO1Q8N1G1 1221 aaKnown RBP17.35■□□□□ 0.37
CCDC40-202ENST00000374876 CPLX3Q8WVH0 158 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 PLIN2Q99541 437 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 MAPK8IP1Q9UQF2 711 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 ZNF536O15090 1300 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 hCG_1984214I3L0E3 225 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 KCNB1Q14721 858 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 GPR142Q7Z601 462 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 CABP7Q86V35 215 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 ZNF713Q8N859 430 aaPredicted RBP17.35■□□□□ 0.37
CCDC40-202ENST00000374876 NAA15Q9BXJ9 866 aaKnown RBP17.35■□□□□ 0.37
CCDC40-202ENST00000374876 CUEDC2Q9H467 287 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 GABRQQ9UN88 632 aa17.35■□□□□ 0.37
CCDC40-202ENST00000374876 A0A0G2JMZ2 1700 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 ESYT2A0FGR8 921 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 LRRC10BA6NIK2 292 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 STIM1Q13586 685 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 TCP11X2Q5H9J9 407 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 ITIH6Q6UXX5 1313 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 CTU1Q7Z7A3 348 aaKnown RBP17.34■□□□□ 0.37
CCDC40-202ENST00000374876 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 TBCKQ8TEA7 893 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 TEX13BQ9BXU2 312 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
CCDC40-202ENST00000374876 JMJD4Q9H9V9 463 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 KBTBD4Q9NVX7 518 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 BIN2Q9UBW5 565 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms