RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 MSH2P43246 934 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 MFAP3P55082 362 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 IFT88Q13099 833 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 ZC3H12BQ5HYM0 836 aaKnown RBP12.15□□□□□ -0.46
COL5A2-201ENST00000374866 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 OR6B3Q8NGW1 331 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 SMYD3Q9H7B4 428 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 ERBB3P21860 1342 aa12.15□□□□□ -0.46
COL5A2-201ENST00000374866 MCF2LO15068 1137 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.47
COL5A2-201ENST00000374866 HIP1RO75146 1068 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 HSPD1P10809 573 aaKnown RBP12.15□□□□□ -0.47
COL5A2-201ENST00000374866 GSPT1P15170 499 aaKnown RBP12.15□□□□□ -0.47
COL5A2-201ENST00000374866 CCT5P48643 541 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 NUMBP49757 651 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 CTTNQ14247 550 aaKnown RBP12.15□□□□□ -0.47
COL5A2-201ENST00000374866 PCGF5Q86SE9 256 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 RFWD2Q8NHY2 731 aa12.15□□□□□ -0.47
COL5A2-201ENST00000374866 CREB3O43889 395 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 SOX11P35716 441 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 RBBP7Q16576 425 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 GREM2Q9H772 168 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 ANP32DO95626 131 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 EEF1DP29692 281 aaKnown RBP12.14□□□□□ -0.47
COL5A2-201ENST00000374866 Q9H521 79 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 GINM1Q9NU53 330 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 GTPBP10A4D1E9 387 aaKnown RBP12.14□□□□□ -0.47
COL5A2-201ENST00000374866 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 CYP2D7A0A087X1C5 515 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
COL5A2-201ENST00000374866 CACNB3P54284 484 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
COL5A2-201ENST00000374866 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
COL5A2-201ENST00000374866 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
COL5A2-201ENST00000374866 TEKT2Q9UIF3 430 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 SMC5Q8IY18 1101 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 PDE11AQ9HCR9 933 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 ABCC10Q5T3U5 1492 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 MECOMQ03112 1051 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 AGR3Q8TD06 166 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 EPS15L1Q9UBC2 864 aa12.14□□□□□ -0.47
COL5A2-201ENST00000374866 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ANKRD20A4Q4UJ75 823 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ANKRD20A8PQ5CZ79 823 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ANKRD20A2Q5SQ80 823 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ANKRD20A1Q5TYW2 823 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ARMC9Q7Z3E5 817 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 TAGAPQ8N103 731 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 POLR3CQ9BUI4 534 aaPredicted RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 PASKQ96RG2 1323 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 MYO1FO00160 1098 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 TUBB4AP04350 444 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 NR2F2P24468 414 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ARL4AP40617 200 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 NUDCD1Q96RS6 583 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 RRAGDQ9NQL2 400 aaPredicted RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 SCG2P13521 617 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 NME3Q13232 169 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 DRP2Q13474 957 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 PPP6R3Q5H9R7 873 aaPredicted RBP12.13□□□□□ -0.47
COL5A2-201ENST00000374866 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 DPYSL4O14531 572 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 ATXN7L3BQ96GX2 97 aa12.13□□□□□ -0.47
COL5A2-201ENST00000374866 RBL2Q08999 1139 aa12.12□□□□□ -0.47
COL5A2-201ENST00000374866 FASTKD5Q7L8L6 764 aaKnown RBP12.12□□□□□ -0.47
COL5A2-201ENST00000374866 OR8K1Q8NGG5 319 aa12.12□□□□□ -0.47
COL5A2-201ENST00000374866 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
COL5A2-201ENST00000374866 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
COL5A2-201ENST00000374866 EIF2AK2P19525 551 aaKnown RBP12.12□□□□□ -0.47
COL5A2-201ENST00000374866 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms