RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
PRPF4-202ENST00000374199 VWA5AO00534 786 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 EYA4O95677 639 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
PRPF4-202ENST00000374199 RBL2Q08999 1139 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 MEA1Q16626 185 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 ERMNQ8TAM6 284 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 IQCDQ96DY2 449 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 STRA6Q9BX79 667 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 KIAA1024Q9UPX6 916 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.01□□□□□ -0.17
PRPF4-202ENST00000374199 E9PMD0 336 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 CCP110O43303 1012 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 SLITRK3O94933 977 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 LYPLA2O95372 231 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 ITGB5P18084 799 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 XRRA1Q6P2D8 792 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 ZNF662Q6ZS27 426 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 FAM114A1Q8IWE2 563 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 RETREG2Q8NC44 543 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 ZNF280CQ8ND82 737 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 NEK9Q8TD19 979 aa14.01□□□□□ -0.17
PRPF4-202ENST00000374199 EIF2AK1Q9BQI3 630 aaKnown RBP14.01□□□□□ -0.17
PRPF4-202ENST00000374199 RNF225M0QZC1 329 aaPredicted RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 HNRNPH3P31942 346 aaKnown RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 HOXD13P35453 343 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 FILIP1LQ4L180 1135 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 ANGEL2Q5VTE6 544 aaKnown RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 CCDC84Q86UT8 332 aaPredicted RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 CDK5RAP3Q96JB5 506 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 FIZ1Q96SL8 496 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 BAG1Q99933 345 aaPredicted RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 AS3MTQ9HBK9 375 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 OLFML3Q9NRN5 406 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF4-202ENST00000374199 PSMC6P62333 389 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 CDK17Q00537 523 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 MTMR2Q13614 643 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 CCDC174Q6PII3 467 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 KRT26Q7Z3Y9 468 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 CNGA4Q8IV77 575 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 SYTL5Q8TDW5 730 aaPredicted RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 L3MBTL3Q96JM7 780 aaPredicted RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 SRRTQ9BXP5 876 aaKnown RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 L2HGDHQ9H9P8 463 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 CAPN11Q9UMQ6 739 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 TRAF3IP3Q9Y228 551 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 POTEFA5A3E0 1075 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 NFIBO00712 420 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 FANCGO15287 622 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 POTEIP0CG38 1075 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 DNM2P50570 870 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 SYCP1Q15431 976 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 EDRF1Q3B7T1 1238 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 POTEGQ6S5H5 508 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 POTEEQ6S8J3 1075 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 PPP4R3CPQ6ZMV5 832 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 SCFD1Q8WVM8 642 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 CEP63Q96MT8 703 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 SENP7Q9BQF6 1050 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 FGFBP2Q9BYJ0 223 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 WDR11Q9BZH6 1224 aa14□□□□□ -0.17
PRPF4-202ENST00000374199 ZNF214Q9UL59 606 aaPredicted RBP14□□□□□ -0.17
PRPF4-202ENST00000374199 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
PRPF4-202ENST00000374199 IKQ13123 557 aaPredicted RBP13.99□□□□□ -0.17
PRPF4-202ENST00000374199 C1orf186Q6ZWK4 172 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 CSGALNACT2Q8N6G5 542 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 GLIS3Q8NEA6 775 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 HPS3Q969F9 1004 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 ABHD10Q9NUJ1 306 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 PANK4Q9NVE7 773 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 SIK3Q9Y2K2 1263 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 PHLPP2Q6ZVD8 1323 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRPF4-202ENST00000374199 DSG3P32926 999 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 HSP90AA4PQ58FG1 418 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 MUM1L1Q5H9M0 696 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 CATSPERGQ6ZRH7 1159 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
PRPF4-202ENST00000374199 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
PRPF4-202ENST00000374199 UBE4BO95155 1302 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 MYH11P35749 1972 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 EPHA7Q15375 998 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 DPY19L2P1Q6NXN4 242 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 LBX2Q6XYB7 198 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 KCNN1Q92952 543 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 CNOT6LQ96LI5 555 aaKnown RBP13.98□□□□□ -0.17
PRPF4-202ENST00000374199 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 AGO4Q9HCK5 861 aaKnown RBP13.98□□□□□ -0.17
PRPF4-202ENST00000374199 SLC39A2Q9NP94 309 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 R3HCC1Q9Y3T6 440 aaKnown RBP13.98□□□□□ -0.17
PRPF4-202ENST00000374199 COBLO75128 1261 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 USP2O75604 605 aaPredicted RBP13.98□□□□□ -0.17
PRPF4-202ENST00000374199 CFBP00751 764 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 TKFCQ3LXA3 575 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms