RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 SCN9AQ15858 1988 aa13.89□□□□□ -0.19
TSPAN6-201ENST00000373020 MEIS2O14770 477 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 ZNF185O15231 689 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 EEF2P13639 858 aaKnown RBP13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 MAP9Q49MG5 647 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 GPBP1Q86WP2 473 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 MMGT1Q8N4V1 131 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 ETNPPLQ8TBG4 499 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 RUBCNQ92622 972 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 KANSL2Q9H9L4 492 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 TRAF5O00463 557 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 AKR1B10O60218 316 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 ALDH1B1P30837 517 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 SLC12A3P55017 1021 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 TATDN1Q6P1N9 297 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 SLFN12Q8IYM2 578 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 CCDC155Q8N6L0 562 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 ACBD3Q9H3P7 528 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 CALCOCO1Q9P1Z2 691 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 FAM198AQ9UFP1 575 aa13.88□□□□□ -0.19
TSPAN6-201ENST00000373020 TBX3O15119 743 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MARCH6O60337 910 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 TLR2O60603 784 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 N4BP1O75113 896 aaKnown RBP13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MED24O75448 989 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MOCS3O95396 460 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 SLC1A4P43007 532 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MMP14P50281 582 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 SHROOM1Q2M3G4 852 aaPredicted RBP13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 CCDC40Q4G0X9 1142 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 SLFN13Q68D06 897 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 PODNQ7Z5L7 613 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 CAGE1Q8TC20 777 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MYH10P35580 1976 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 DDTLA6NHG4 134 aaPredicted RBP13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 MAGEA1P43355 309 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 GYS2P54840 703 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 ARHGAP4P98171 946 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 Q4G0T1 1027 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 ARSHQ5FYA8 562 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 CACNA2D4Q7Z3S7 1137 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 LENG9Q96B70 501 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 ALS2CR12Q96Q35 445 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 SALL4Q9UJQ4 1053 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 FAM184BQ9ULE4 1060 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 HYOU1Q9Y4L1 999 aa13.87□□□□□ -0.19
TSPAN6-201ENST00000373020 C2orf54Q08AI8 447 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 CERKLQ49MI3 558 aaPredicted RBP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 RNF10Q8N5U6 811 aaKnown RBP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 PI4KBQ9UBF8 816 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 HPCAL4Q9UM19 191 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 FAN1Q9Y2M0 1017 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 COL2A1P02458 1487 aaPredicted RBP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 NPHP3-ACAD11A0A0J9YXS1 232 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 SERPING1P05155 500 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 SREBF1P36956 1147 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 STAT3P40763 770 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 GFPT1Q06210 699 aaPredicted RBP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 COG1Q8WTW3 980 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 LSM14BQ9BX40 385 aaKnown RBP13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 GANQ9H2C0 597 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 EMILIN3Q9NT22 766 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 VPS18Q9P253 973 aa13.86□□□□□ -0.19
TSPAN6-201ENST00000373020 ATRNL1Q5VV63 1379 aa13.85□□□□□ -0.19
TSPAN6-201ENST00000373020 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
TSPAN6-201ENST00000373020 TRIM37O94972 964 aa13.85□□□□□ -0.19
TSPAN6-201ENST00000373020 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms