RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 BTNL9Q6UXG8 535 aa32.05■■■□□ 2.72
SSBP3-204ENST00000371320 MSANTD4Q8NCY6 345 aa32.05■■■□□ 2.72
SSBP3-204ENST00000371320 SUPT20HQ8NEM7 779 aa32.05■■■□□ 2.72
SSBP3-204ENST00000371320 CEP63Q96MT8 703 aa32.05■■■□□ 2.72
SSBP3-204ENST00000371320 ST7Q9NRC1 585 aa32.05■■■□□ 2.72
SSBP3-204ENST00000371320 PLEKP08567 350 aaPredicted RBP32.04■■■□□ 2.72
SSBP3-204ENST00000371320 SLC12A3P55017 1021 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 RAD51AP2Q09MP3 1159 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 RRP1BQ14684 758 aaKnown RBP32.04■■■□□ 2.72
SSBP3-204ENST00000371320 NCAPH2Q6IBW4 605 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 NELFCDQ8IXH7 590 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 PPIP5K2O43314 1243 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 KIF20AO95235 890 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 VAV2P52735 878 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 KIF5AQ12840 1032 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 RRAGAQ7L523 313 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 CATSPER3Q86XQ3 398 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 NEK11Q8NG66 645 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 TSGA10Q9BZW7 698 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 ARHGAP20Q9P2F6 1191 aa32.04■■■□□ 2.72
SSBP3-204ENST00000371320 RGS17Q9UGC6 210 aaPredicted RBP32.04■■■□□ 2.72
SSBP3-204ENST00000371320 A0A1W2PRG0 241 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 SASH3O75995 380 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 ATP1A1P05023 1023 aaKnown RBP32.03■■■□□ 2.72
SSBP3-204ENST00000371320 LENG9Q96B70 501 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 HDAC6Q9UBN7 1215 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 YDJCA8MPS7 323 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 FAM86B1E9PN63 330 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 FAM86B2P0C5J1 330 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 ARSHQ5FYA8 562 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 SPICE1Q8N0Z3 855 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.03■■■□□ 2.721e-6■■■■■ 31.8
SSBP3-204ENST00000371320 RAB21Q9UL25 225 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 SAR1BQ9Y6B6 198 aa32.03■■■□□ 2.72
SSBP3-204ENST00000371320 PITPNM2Q9BZ72 1349 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 LRRC53A6NM62 1247 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 ZNF263O14978 683 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 GNA14O95837 355 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 TAL1P17542 331 aaPredicted RBP32.02■■■□□ 2.72
SSBP3-204ENST00000371320 PAPD7Q5XG87 772 aaKnown RBP32.02■■■□□ 2.72
SSBP3-204ENST00000371320 SCFD1Q8WVM8 642 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 FAM20AQ96MK3 541 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 ZHX3Q9H4I2 956 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 EMILIN3Q9NT22 766 aa32.02■■■□□ 2.72
SSBP3-204ENST00000371320 COL2A1P02458 1487 aaPredicted RBP32.02■■■□□ 2.72
SSBP3-204ENST00000371320 FRMD3A2A2Y4 597 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 LONRF2Q1L5Z9 754 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 KRT26Q7Z3Y9 468 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 PURBQ96QR8 312 aaKnown RBP32.01■■■□□ 2.72
SSBP3-204ENST00000371320 PNKPQ96T60 521 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 EDEM3Q9BZQ6 932 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 DEF6Q9H4E7 631 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 TMOD2Q9NZR1 351 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 HERC5Q9UII4 1024 aaKnown RBP32.01■■■□□ 2.72
SSBP3-204ENST00000371320 PRR12Q9ULL5 1215 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 SYNPO2Q9UMS6 1093 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 DNM3Q9UQ16 869 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 DUSP10Q9Y6W6 482 aa32.01■■■□□ 2.72
SSBP3-204ENST00000371320 RHOXF2BP0C7M4 288 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 RPA1P27694 616 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 HOXA13P31271 388 aaPredicted RBP32.01■■■□□ 2.71
SSBP3-204ENST00000371320 EIF4A3P38919 411 aaKnown RBP32.01■■■□□ 2.71
SSBP3-204ENST00000371320 CACNA2D4Q7Z3S7 1137 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 CCDC155Q8N6L0 562 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 BAP1Q92560 729 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 RHOXF2Q9BQY4 288 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 STK24Q9Y6E0 443 aa32.01■■■□□ 2.71
SSBP3-204ENST00000371320 OPLAHO14841 1288 aa32■■■□□ 2.71
SSBP3-204ENST00000371320 CIITAP33076 1130 aa32■■■□□ 2.71
SSBP3-204ENST00000371320 KIF11P52732 1056 aa32■■■□□ 2.71
SSBP3-204ENST00000371320 TERF2Q15554 542 aa32■■■□□ 2.71
SSBP3-204ENST00000371320 SMCR8Q8TEV9 937 aaPredicted RBP32■■■□□ 2.71
SSBP3-204ENST00000371320 HNRNPLLQ8WVV9 542 aaKnown RBP32■■■□□ 2.71
SSBP3-204ENST00000371320 IFIH1Q9BYX4 1025 aaKnown RBP32■■■□□ 2.71
SSBP3-204ENST00000371320 KCTD10Q9H3F6 313 aa32■■■□□ 2.71
SSBP3-204ENST00000371320 MACROD2A1Z1Q3 448 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 USO1O60763 962 aaKnown RBP31.99■■■□□ 2.71
SSBP3-204ENST00000371320 KCNMA1Q12791 1236 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 SECISBP2LQ93073 1101 aaKnown RBP31.99■■■□□ 2.71
SSBP3-204ENST00000371320 FUT8Q9BYC5 575 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 PCDHA13Q9Y5I0 950 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 TCP10L2B9ZVM9 353 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 MEIS1O00470 390 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 SPATA31C1P0DKV0 1188 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 PSMC6P62333 389 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 PDXDC1Q6P996 788 aa31.99■■■□□ 2.71
SSBP3-204ENST00000371320 AKR1B10O60218 316 aa31.98■■■□□ 2.71
SSBP3-204ENST00000371320 ZNF76P36508 570 aa31.98■■■□□ 2.71
SSBP3-204ENST00000371320 PABPC4Q13310 644 aaKnown RBP eCLIP31.98■■■□□ 2.712e-66■■■■■ 36.3
SSBP3-204ENST00000371320 NOA1Q8NC60 698 aaKnown RBP31.98■■■□□ 2.71
SSBP3-204ENST00000371320 ARHGEF10LQ9HCE6 1279 aa31.98■■■□□ 2.71
SSBP3-204ENST00000371320 MSH4O15457 936 aa31.98■■■□□ 2.71
SSBP3-204ENST00000371320 C21orf2O43822 256 aa31.98■■■□□ 2.71
SSBP3-204ENST00000371320 POTEAQ6S8J7 498 aa31.98■■■□□ 2.71
SSBP3-204ENST00000371320 SYT2Q8N9I0 419 aaPredicted RBP31.98■■■□□ 2.71
SSBP3-204ENST00000371320 ANO9A1A5B4 782 aa31.97■■■□□ 2.71
SSBP3-204ENST00000371320 ERLIN1O75477 346 aa31.97■■■□□ 2.71
SSBP3-204ENST00000371320 LCA5LO95447 670 aa31.97■■■□□ 2.71
SSBP3-204ENST00000371320 ECE1P42892 770 aa31.97■■■□□ 2.71
SSBP3-204ENST00000371320 STAT2P52630 851 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms