RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CXCL10P02778 98 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 PABPC4Q13310 644 aaKnown RBP eCLIP7.75□□□□□ -1.173e-14■■□□□ 13.1
CSDE1-204ENST00000369530 PCYT2Q99447 389 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 TRIM43BA6NCK2 446 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 SMC2O95347 1197 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 CIITAP33076 1130 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 MCM2P49736 904 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 ALDH5A1P51649 535 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 MARCH8Q5T0T0 291 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 SYTL5Q8TDW5 730 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 U2AF1L4Q8WU68 220 aaKnown RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 TRIM43Q96BQ3 446 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 C16orf70Q9BSU1 422 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 TEX13BQ9BXU2 312 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 UBIAD1Q9Y5Z9 338 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 TDRD15B5MCY1 1934 aaKnown RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 SMPD1P17405 629 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 FAM109BQ6ICB4 259 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 FILIP1Q7Z7B0 1213 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 TADA2BQ86TJ2 420 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 PURBQ96QR8 312 aaKnown RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 TINF2Q9BSI4 451 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 CNNM2Q9H8M5 875 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 TOMM22Q9NS69 142 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 MAP2K7O14733 419 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ADCY3O60266 1144 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 IPO7O95373 1038 aaKnown RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ZKSCAN1P17029 563 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 USP8P40818 1118 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ANAPC15P60006 121 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 FAAP100Q0VG06 881 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 SARM1Q6SZW1 724 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 RBM43Q6ZSC3 357 aaKnown RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 DTNBO60941 627 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 EIF3JO75822 258 aaKnown RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ELNP15502 786 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 KCNA2P16389 499 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 CRYMQ14894 314 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 SLC5A9Q2M3M2 681 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 PPP1R18Q6NYC8 613 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 TBC1D5Q92609 795 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ERCC4Q92889 916 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ARHGEF10LQ9HCE6 1279 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 ORC3Q9UBD5 711 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-204ENST00000369530 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
CSDE1-204ENST00000369530 PRDM1O75626 825 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 PTGS1P23219 599 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 RGS2P41220 211 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 STAT2P52630 851 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 LRRC41Q15345 812 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 LRIT3Q3SXY7 679 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 GPATCH4Q5T3I0 446 aaKnown RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 WLSQ5T9L3 541 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 VSIG10LQ86VR7 867 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 C4orf32Q8N8J7 132 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 TMEM87BQ96K49 555 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 ZMYND12Q9H0C1 365 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 TRIM17Q9Y577 477 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 ABCB11O95342 1321 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 SPATA31C2B4DYI2 1134 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 BIRC2Q13490 618 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 SYDE2Q5VT97 1194 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 SLFN13Q68D06 897 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 ISM2Q6H9L7 571 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 FMNL3Q8IVF7 1028 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 IL31RAQ8NI17 732 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 KRT23Q9C075 422 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 SH2D4AQ9H788 454 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 NUP210Q8TEM1 1887 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 MBLAC1A4D2B0 266 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 RPS6KB1P23443 525 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 ZRSR1Q15695 479 aaKnown RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 C1QTNF12Q5T7M4 302 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 KCNV1Q6PIU1 500 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 APOA5Q6Q788 366 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 SLC39A5Q6ZMH5 540 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 GADL1Q6ZQY3 521 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 NIPA1Q7RTP0 329 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 GTF3C6Q969F1 213 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 SRRTQ9BXP5 876 aaKnown RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 PDLIM7Q9NR12 457 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 PXMP2Q9NR77 195 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 ARGLU1Q9NWB6 273 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-204ENST00000369530 CLIP2Q9UDT6 1046 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 ADAM21Q9UKJ8 722 aa7.73□□□□□ -1.17
CSDE1-204ENST00000369530 TRIOO75962 3097 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 B4E1Z4 1266 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 SOX1O00570 391 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 DUSP11O75319 330 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 OAS2P29728 719 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 CNTN2Q02246 1040 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 CCDC178Q5BJE1 867 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 CCDC186Q7Z3E2 898 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 JAKMIP1Q96N16 626 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 WNT8AQ9H1J5 351 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 CPA1P15085 419 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms