RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 EML1O00423 815 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 SPATA31C1P0DKV0 1188 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 CCT6AP40227 531 aaKnown RBP12.42□□□□□ -0.42
VANGL1-203ENST00000369509 HAUS3Q68CZ6 603 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 NCAPH2Q6IBW4 605 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 LARP4BQ92615 738 aaKnown RBP12.42□□□□□ -0.42
VANGL1-203ENST00000369509 CDK5RAP3Q96JB5 506 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 ZNF577Q9BSK1 485 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
VANGL1-203ENST00000369509 WDR11Q9BZH6 1224 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 TRIM9Q9C026 710 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 KCNH7Q9NS40 1196 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 MCM3APO60318 1980 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 IPO5O00410 1097 aaKnown RBP12.42□□□□□ -0.42
VANGL1-203ENST00000369509 RPN1P04843 607 aaKnown RBP12.42□□□□□ -0.42
VANGL1-203ENST00000369509 ZBTB48P10074 688 aaPredicted RBP12.42□□□□□ -0.42
VANGL1-203ENST00000369509 OSBPP22059 807 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 RPA1P27694 616 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 GTF2A2P52657 109 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 VSIG10LQ86VR7 867 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 CATSPER3Q86XQ3 398 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 MLKLQ8NB16 471 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 BRI3BPQ8WY22 251 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 MRFAP1L1Q96HT8 127 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 RIT2Q99578 217 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 PAGR1Q9BTK6 254 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 FBXO40Q9UH90 709 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 PYCARDQ9ULZ3 195 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 SLC45A1Q9Y2W3 748 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 PFASO15067 1338 aa12.42□□□□□ -0.42
VANGL1-203ENST00000369509 IKBKBO14920 756 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 DHX15O43143 795 aaKnown RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 CETPP11597 493 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 TPM4P67936 248 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 ITGB3BPQ13352 177 aaPredicted RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 MCM6Q14566 821 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 KCNB1Q14721 858 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 SPRYD7Q5W111 196 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 CNNM4Q6P4Q7 775 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 C17orf53Q8N3J3 647 aaPredicted RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 NSUN6Q8TEA1 469 aaKnown RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 MED15Q96RN5 788 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 HSD3B7Q9H2F3 369 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 CCL15-CCL14A0A0B4J2E2 113 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 BTBD19C9JJ37 291 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 GAS7O60861 476 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 NR3C2P08235 984 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 CCND2P30279 289 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 MTMR1Q13613 665 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 CCL15Q16663 113 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 Q3C1V9 767 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 SV2BQ7L1I2 683 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 ERMNQ8TAM6 284 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 INPP4AQ96PE3 977 aaPredicted RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 HSD17B14Q9BPX1 270 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 POLR3CQ9BUI4 534 aaPredicted RBP12.41□□□□□ -0.42
VANGL1-203ENST00000369509 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 KIAA1024Q9UPX6 916 aa12.41□□□□□ -0.42
VANGL1-203ENST00000369509 ARID2Q68CP9 1835 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 MYMKA6NI61 221 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 RGS20O76081 388 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 RHOBTB3O94955 611 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 SLC25A27O95847 323 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 CYP2C8P10632 490 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 MYCLP12524 364 aaPredicted RBP12.4□□□□□ -0.42
VANGL1-203ENST00000369509 ERCC3P19447 782 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 RBM10P98175 930 aaKnown RBP12.4□□□□□ -0.42
VANGL1-203ENST00000369509 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
VANGL1-203ENST00000369509 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 ANKRD23Q86SG2 305 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 SMYD4Q8IYR2 804 aaPredicted RBP12.4□□□□□ -0.42
VANGL1-203ENST00000369509 DNERQ8NFT8 737 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 EIF2AK1Q9BQI3 630 aaKnown RBP12.4□□□□□ -0.42
VANGL1-203ENST00000369509 TEKT3Q9BXF9 490 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
VANGL1-203ENST00000369509 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 E9PMD0 336 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 PDHXO00330 501 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.43
VANGL1-203ENST00000369509 COPB2P35606 906 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 ERVK-24P63145 666 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 AMPD3Q01432 767 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 MYL5Q02045 173 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 CNTN2Q02246 1040 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 KMT5BQ4FZB7 885 aa12.39□□□□□ -0.43
VANGL1-203ENST00000369509 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms