RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 ARHGAP1Q07960 439 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 FAAP100Q0VG06 881 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.4
PRKN-203ENST00000366894 JAKMIP3Q5VZ66 844 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 HSCBQ8IWL3 235 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 DHX37Q8IY37 1157 aaKnown RBP17.58■□□□□ 0.4
PRKN-203ENST00000366894 SNX21Q969T3 373 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 TOX2Q96NM4 488 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 INPP4AQ96PE3 977 aaPredicted RBP17.58■□□□□ 0.4
PRKN-203ENST00000366894 PHF20Q9BVI0 1012 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 TCEAL9Q9UHQ7 104 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 SMC3Q9UQE7 1217 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 CDH23Q9H251 3354 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
PRKN-203ENST00000366894 LARGE1O95461 756 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 PSMC6P62333 389 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 PURAQ00577 322 aaKnown RBP17.57■□□□□ 0.4
PRKN-203ENST00000366894 MTMR1Q13613 665 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 NONOQ15233 471 aaKnown RBP eCLIP17.57■□□□□ 0.4
PRKN-203ENST00000366894 SHHQ15465 462 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 CEP55Q53EZ4 464 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 VTI1AQ96AJ9 217 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 JADE2Q9NQC1 790 aa17.57■□□□□ 0.4
PRKN-203ENST00000366894 SPTBN5Q9NRC6 3674 aaKnown RBP17.57■□□□□ 0.4
PRKN-203ENST00000366894 PRUNE2Q8WUY3 3088 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 SPATA31C2B4DYI2 1134 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 KIAA0355O15063 1070 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
PRKN-203ENST00000366894 CLTBP09497 229 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
PRKN-203ENST00000366894 ARHGAP4P98171 946 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
PRKN-203ENST00000366894 SP2Q02086 613 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 FAM126BQ8IXS8 530 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
PRKN-203ENST00000366894 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
PRKN-203ENST00000366894 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
PRKN-203ENST00000366894 MXRA8Q9BRK3 442 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 RTEL1Q9NZ71 1219 aa17.56■□□□□ 0.4
PRKN-203ENST00000366894 PPFIA4O75335 1185 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 MYL3P08590 195 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 FDPSP14324 419 aaKnown RBP17.55■□□□□ 0.4
PRKN-203ENST00000366894 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 DGKDQ16760 1214 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 BADQ92934 168 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 TBX21Q9UL17 535 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 UBIAD1Q9Y5Z9 338 aa17.55■□□□□ 0.4
PRKN-203ENST00000366894 SCN10AQ9Y5Y9 1956 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 DCDC2CA8MYV0 355 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 H3BQV1 296 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
PRKN-203ENST00000366894 NOP56O00567 594 aaKnown RBP17.54■□□□□ 0.4
PRKN-203ENST00000366894 CD4P01730 458 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 MMP1P03956 469 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 MMP3P08254 477 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 GCFC2P16383 781 aaKnown RBP17.54■□□□□ 0.4
PRKN-203ENST00000366894 MOXD1Q6UVY6 613 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 FBXO18Q8NFZ0 1043 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 MYLIPQ8WY64 445 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 SDF4Q9BRK5 362 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 BCAS3Q9H6U6 928 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 TBC1D22BQ9NU19 505 aa17.54■□□□□ 0.4
PRKN-203ENST00000366894 MROH7Q68CQ1 1323 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 MEIS1O00470 390 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 ADAMTS3O15072 1205 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 JAK2O60674 1132 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 FOSL2P15408 326 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 UBA1P22314 1058 aaKnown RBP17.53■□□□□ 0.4
PRKN-203ENST00000366894 CIITAP33076 1130 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 CELF3Q5SZQ8 465 aaKnown RBP17.53■□□□□ 0.4
PRKN-203ENST00000366894 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 KRT40Q6A162 431 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 PPTC7Q8NI37 304 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 MTG1Q9BT17 334 aaPredicted RBP17.53■□□□□ 0.4
PRKN-203ENST00000366894 KATNAL1Q9BW62 490 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 FOXP1Q9H334 677 aaPredicted RBP17.53■□□□□ 0.4
PRKN-203ENST00000366894 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 TMEM260Q9NX78 707 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 KCNJ14Q9UNX9 436 aa17.53■□□□□ 0.4
PRKN-203ENST00000366894 TTC28Q96AY4 2481 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 CUL4AQ13619 759 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 BECN1Q14457 450 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.4
PRKN-203ENST00000366894 METTL7BQ6UX53 244 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 TBCKQ8TEA7 893 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 PPP1R13LQ8WUF5 828 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 SYMPKQ92797 1274 aaKnown RBP17.52■□□□□ 0.4
PRKN-203ENST00000366894 KAT2BQ92831 832 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 SPATA33Q96N06 139 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 AIFM3Q96NN9 605 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 TTYH1Q9H313 450 aaPredicted RBP17.52■□□□□ 0.4
PRKN-203ENST00000366894 PRDM6Q9NQX0 595 aa17.52■□□□□ 0.4
PRKN-203ENST00000366894 KCNH7Q9NS40 1196 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms