RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 DTX3Q8N9I9 347 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 BEND2Q8NDZ0 799 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 SCYL1Q96KG9 808 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 C16orf92Q96LL3 132 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 FCRL4Q96PJ5 515 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 MPHOSPH9Q99550 1183 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 MTA3Q9BTC8 594 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 KATNBL1Q9H079 304 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 TUT1Q9H6E5 874 aaKnown RBP0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 ANO2Q9NQ90 1003 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 PLA2G3Q9NZ20 509 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 DTLQ9NZJ0 730 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 GULP1Q9UBP9 304 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 SPG7Q9UQ90 795 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 COL3A1P02461 1466 aaPredicted RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 PNMA6FA0A0J9YX94 578 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 H0Y8X5 98 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 SGSM2O43147 1006 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ARHGAP6O43182 974 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ICMTO60725 284 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 FUCA1P04066 466 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 CD3EP07766 207 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 USP17L7P0C7H9 530 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 COL6A1P12109 1028 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 MCAMP43121 646 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 LIG3P49916 1009 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 KRTAP10-12P60413 245 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 SLC25A3Q00325 362 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 DUSP8Q13202 625 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 AUHQ13825 339 aaKnown RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 NFYCQ13952 458 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 TOB2Q14106 344 aaPredicted RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 EZH2Q15910 746 aaKnown RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 RNF151Q2KHN1 245 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 MIDNQ504T8 468 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ARSHQ5FYA8 562 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 NOL9Q5SY16 702 aaKnown RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 HEATR6Q6AI08 1181 aaKnown RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 VASNQ6EMK4 673 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF425Q6IV72 752 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 TEPPQ6URK8 271 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 TMC5Q6UXY8 1006 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF276Q8N554 614 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 TMEM255BQ8WV15 326 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 JARID2Q92833 1246 aaPredicted RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 RGMAQ96B86 450 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF512BQ96KM6 892 aaPredicted RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 PPP1R10Q96QC0 940 aaKnown RBP0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 LRFN3Q9BTN0 628 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 TXLNGQ9NUQ3 528 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 GMIPQ9P107 970 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ASH2LQ9UBL3 628 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 FZD1Q9UP38 647 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF652Q9Y2D9 606 aa0.86□□□□□ -2.27
RNU6-54P-201ENST00000365563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF185O15231 689 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 INSIG1O15503 277 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 RBMXL2O75526 392 aaKnown RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 KNG1P01042 644 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF888P0CJ79 500 aaPredicted RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 SNHG28P0DPA3 235 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 PAMP19021 973 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 SSFA2P28290 1259 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 CXCR5P32302 372 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 SEPHS1P49903 392 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 FOXG1P55316 489 aaPredicted RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 SRSF4Q08170 494 aaKnown RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 ENOX2Q16206 610 aaKnown RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 TIGD2Q4W5G0 525 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 FKBP15Q5T1M5 1219 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 MROH9Q5TGP6 573 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 NBPF6Q5VWK0 638 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 GSG1LQ6UXU4 331 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 RIOX2Q8IUF8 465 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 C7orf61Q8IZ16 206 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 PDPRQ8NCN5 879 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 CAGE1Q8TC20 777 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 SLC9A6Q92581 669 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 NBPF4Q96M43 638 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 FCRL3Q96P31 734 aaPredicted RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 SETDB2Q96T68 719 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 MLST8Q9BVC4 326 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 PRDM13Q9H4Q3 707 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 C12orf49Q9H741 205 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 TLK1Q9UKI8 766 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 LRP12Q9Y561 859 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 PCDHB4Q9Y5E5 795 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 FHOD1Q9Y613 1164 aa0.85□□□□□ -2.27
RNU6-54P-201ENST00000365563 NPHP3-ACAD11A0A0J9YXS1 232 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 WDR91A4D1P6 747 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 FAM20BO75063 409 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 THBDP07204 575 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 IFNGR1P15260 489 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 TYRP1P17643 537 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 TFE3P19532 575 aaPredicted RBP0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 POLD1P28340 1107 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 MAPK8P45983 427 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 POLGP54098 1239 aaPredicted RBP0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 RRADP55042 308 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms