RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 FRS2Q8WU20 508 aa0.96□□□□□ -2.26
RNU6-340P-201ENST00000364005 KATNBL1Q9H079 304 aa0.96□□□□□ -2.26
RNU6-340P-201ENST00000364005 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.96□□□□□ -2.26
RNU6-340P-201ENST00000364005 FZD1Q9UP38 647 aa0.96□□□□□ -2.26
RNU6-340P-201ENST00000364005 PRR36Q9H6K5 1346 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 H0Y8X5 98 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 KRT86O43790 486 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 ATG7O95352 703 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 MATN4O95460 622 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 KNG1P01042 644 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 IGLV2-14P01704 120 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 IFNGR1P15260 489 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 TYRP1P17643 537 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 MT3P25713 68 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 RAD51AP2Q09MP3 1159 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 KRT81Q14533 505 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 SMAD2Q15796 467 aaKnown RBP0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 ERCC6LQ2NKX8 1250 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 TEPPQ6URK8 271 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 TMC5Q6UXY8 1006 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 Q6YL49 198 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 Q6ZRM9 215 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZNF662Q6ZS27 426 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 REXO1L1PQ8IX06 675 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 GSPT2Q8IYD1 628 aaKnown RBP0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 KRT78Q8N1N4 520 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 DTX3Q8N9I9 347 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 TMC1Q8TDI8 760 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 TOE1Q96GM8 510 aaKnown RBP0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 TMEM176AQ96HP8 235 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 CARD11Q9BXL7 1154 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 MKRN2Q9H000 416 aaKnown RBP0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 PRR13Q9NZ81 148 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZKSCAN5Q9Y2L8 839 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 NR2E1Q9Y466 385 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 HS3ST4Q9Y661 456 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 CACNA1IQ9P0X4 2223 aa0.95□□□□□ -2.26
RNU6-340P-201ENST00000364005 CLEC3AO75596 197 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 HTR3BO95264 441 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 CHGBP05060 677 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 CKMP06732 381 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 RAG1P15918 1043 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 NR4A1P22736 598 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 POLR2BP30876 1174 aaKnown RBP0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 CCKARP32238 428 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 CCT4P50991 539 aaKnown RBP0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 USP14P54578 494 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 AUHQ13825 339 aaKnown RBP0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 MIDNQ504T8 468 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 ARSHQ5FYA8 562 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 AGMOQ6ZNB7 445 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 CPNE8Q86YQ8 564 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZSCAN29Q8IWY8 852 aaPredicted RBP0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 GPR135Q8IZ08 494 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 SUPT20HQ8NEM7 779 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 PLEKHO2Q8TD55 490 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 SEC14L1Q92503 715 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 CITED4Q96RK1 184 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 OSBPL7Q9BZF2 842 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 SRCIN1Q9C0H9 1055 aa0.94□□□□□ -2.26
RNU6-340P-201ENST00000364005 FBXO21O94952 628 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 LRG1P02750 347 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 SNHG28P0DPA3 235 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 TFE3P19532 575 aaPredicted RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 CXCR5P32302 372 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 PTGER1P34995 402 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 PLA2G5P39877 138 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 RRADP55042 308 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 HILS1P60008 231 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 C11orf87Q6NUJ2 197 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 LRRC55Q6ZSA7 311 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 TECPR1Q7Z6L1 1165 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 PROSER2Q86WR7 435 aaPredicted RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 SAMD14Q8IZD0 417 aaPredicted RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 CFHR4Q92496 578 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 ALKBH8Q96BT7 664 aaKnown RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZNF48Q96MX3 618 aaPredicted RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 NELFAQ9H3P2 528 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 KMT5AQ9NQR1 393 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 DTLQ9NZJ0 730 aa0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 PUF60Q9UHX1 559 aaKnown RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 EPN1Q9Y6I3 576 aaPredicted RBP0.93□□□□□ -2.26
RNU6-340P-201ENST00000364005 XDHP47989 1333 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 IGKV2D-30A0A075B6S6 120 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 C7orf72A4D263 438 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 TP73O15350 636 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 INSIG1O15503 277 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ARHGAP6O43182 974 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 BPNT1O95861 308 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 CD3EP07766 207 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 SSFA2P28290 1259 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZEB1P37275 1124 aaPredicted RBP0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 WASP42768 502 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 SLC6A11P48066 632 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 MAN2A2P49641 1150 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 LIG3P49916 1009 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 KRTAP10-1P60331 282 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms