RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBA3-202ENST00000361055 SUPT20HL1Q3ZLR7 823 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 MIIPQ5JXC2 388 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 CNNM4Q6P4Q7 775 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 LEKR1Q6ZMV7 388 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
UBA3-202ENST00000361055 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.21
UBA3-202ENST00000361055 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 RRAGCQ9HB90 399 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 C6orf50Q9HD87 102 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
UBA3-202ENST00000361055 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 GDF11O95390 407 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 PRLRP16471 622 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 MTIF2P46199 727 aaKnown RBP13.76□□□□□ -0.21
UBA3-202ENST00000361055 RAD51AP2Q09MP3 1159 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 KIF5AQ12840 1032 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
UBA3-202ENST00000361055 RCCD1A6NED2 376 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 TTLL1O95922 423 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 CAPN2P17655 700 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 CAP2P40123 477 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 VAV2P52735 878 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 SLC20A2Q08357 652 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
UBA3-202ENST00000361055 IQCEQ6IPM2 695 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 CENPPQ6IPU0 288 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 ZNF341Q9BYN7 854 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 KANSL2Q9H9L4 492 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 PLAGL2Q9UPG8 496 aa13.76□□□□□ -0.21
UBA3-202ENST00000361055 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 SMCO2A6NFE2 343 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 PHF20L1A8MW92 1017 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 ADM5C9JUS6 153 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
UBA3-202ENST00000361055 SRGAP2O75044 1071 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 GH2P01242 217 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 ASIC1P78348 528 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 SPA17Q15506 151 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
UBA3-202ENST00000361055 NEK8Q86SG6 692 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 CCDC42Q96M95 316 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 ABCB11O95342 1321 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 USO1O60763 962 aaKnown RBP13.75□□□□□ -0.21
UBA3-202ENST00000361055 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
UBA3-202ENST00000361055 NAPAP54920 295 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 ITIH3Q06033 890 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 LETM2Q2VYF4 491 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 CALML4Q96GE6 196 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 PCMTD1Q96MG8 357 aaPredicted RBP13.75□□□□□ -0.21
UBA3-202ENST00000361055 TFR2Q9UP52 801 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 JRKLQ9Y4A0 524 aa13.75□□□□□ -0.21
UBA3-202ENST00000361055 DOCK1Q14185 1865 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 SSC5DA1L4H1 1573 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 KLK7P49862 253 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 SEPT2Q15019 361 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 SHROOM1Q2M3G4 852 aaPredicted RBP13.74□□□□□ -0.21
UBA3-202ENST00000361055 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 MMGT1Q8N4V1 131 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 TRIM58Q8NG06 486 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 RUBCNQ92622 972 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 SECISBP2LQ93073 1101 aaKnown RBP13.74□□□□□ -0.21
UBA3-202ENST00000361055 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
UBA3-202ENST00000361055 MMTAG2Q9BU76 263 aaKnown RBP13.74□□□□□ -0.21
UBA3-202ENST00000361055 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 NYAP2Q9P242 653 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
UBA3-202ENST00000361055 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
UBA3-202ENST00000361055 LCA5LO95447 670 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 SYF2O95926 243 aaKnown RBP13.73□□□□□ -0.21
UBA3-202ENST00000361055 ASNSP08243 561 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 FCER1AP12319 257 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 TECP42680 631 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 JAG1P78504 1218 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 VWA3BQ502W6 1294 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 CCDC70Q6NSX1 233 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 FOXR2Q6PJQ5 311 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
UBA3-202ENST00000361055 CCDC84Q86UT8 332 aaPredicted RBP13.73□□□□□ -0.21
UBA3-202ENST00000361055 EDEM3Q9BZQ6 932 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 TMEM51Q9NW97 253 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 STK17AQ9UEE5 414 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 ZNF112Q9UJU3 913 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 TACC1O75410 805 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 POTEJP0CG39 1038 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 IDEP14735 1019 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 ICA1Q05084 483 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 GOLGA6L1Q8N7Z2 621 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 MKL1Q969V6 931 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms