RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 WTIPA6NIX2 430 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 IBSPP21815 317 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 PNOCQ13519 176 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SYCP1Q15431 976 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 RRP12Q5JTH9 1297 aaKnown RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 C6orf15Q6UXA7 325 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 DIS3L2Q8IYB7 885 aaKnown RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SDR42E1Q8WUS8 393 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 TIMMDC1Q9NPL8 285 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 FBXO2Q9UK22 296 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 MORC2Q9Y6X9 1032 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 ERICH2A1L162 156 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 GYG1P46976 350 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 PPP2R5BQ15173 497 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 RILPL1Q5EBL4 403 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 ARMCX5Q6P1M9 558 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SMIM5Q71RC9 77 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 CCAR2Q8N163 923 aaKnown RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 ZNF384Q8TF68 577 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SMARCC1Q92922 1105 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 KCNJ14Q9UNX9 436 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 CASZ1Q86V15 1759 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 KCNJ6P48051 423 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 TPM4P67936 248 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SAFBQ15424 915 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SLC10A5Q5PT55 438 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 NT5DC1Q5TFE4 455 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 CEP135Q66GS9 1140 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 ANKRD18AQ8IVF6 992 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SHISA4Q96DD7 197 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SEC16BQ96JE7 1060 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 BRMS1Q9HCU9 246 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 MINPP1Q9UNW1 487 aa8.31□□□□□ -1.08
CLCN3-202ENST00000360642 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 SMIM22K7EJ46 135 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 KCNQ2O43526 872 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 THBS1P07996 1170 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 BMP6P22004 513 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 SOX9P48436 509 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 ISM2Q6H9L7 571 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 CCDC150Q8NCX0 1101 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 ESR2Q92731 530 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 FAM84BQ96KN1 310 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 CCDC94Q9BW85 323 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 BRIP1Q9BX63 1249 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 GNL3LQ9NVN8 582 aaKnown RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 SUGT1Q9Y2Z0 365 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 PCDHA5Q9Y5H7 936 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 DUOX1Q9NRD9 1551 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 MYO1BO43795 1136 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 DDAH1O94760 285 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 SMC2O95347 1197 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 ITGBL1O95965 494 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 ATP1A3P13637 1013 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 SARSP49591 514 aaKnown RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 MYL5Q02045 173 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 GRIN1Q05586 938 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 DHX8Q14562 1220 aaKnown RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 ENAHQ8N8S7 591 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-202ENST00000360642 LINC00116Q8NCU8 138 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 CNNM3Q8NE01 707 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 UBAC1Q9BSL1 405 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 ABCF2Q9UG63 623 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 PCDHB6Q9Y5E3 794 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 TNKSO95271 1327 aa8.3□□□□□ -1.08
CLCN3-202ENST00000360642 PHF20L1A8MW92 1017 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 PCP11498 1178 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 SMPD1P17405 629 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 PTPN14Q15678 1187 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 PKN1Q16512 942 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 E4F1Q66K89 784 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 MRM1Q6IN84 353 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 TMC6Q7Z403 805 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 JDP2Q8WYK2 163 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 SPC25Q9HBM1 224 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 RAI14Q9P0K7 980 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 SRPRBQ9Y5M8 271 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 TAF1P21675 1872 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 DLEC1Q9Y238 1755 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 FOXN1O15353 648 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 VEGFBP49765 207 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 CLCQ05315 142 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 NCBP1Q09161 790 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 XKR5Q6UX68 686 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 BHMTQ93088 406 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 KCNQ4P56696 695 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 DYNLL1P63167 89 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 ZYXQ15942 572 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 MTERF2Q49AM1 385 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 CAVIN4Q5BKX8 364 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 SPECC1Q5M775 1068 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 CCDC112Q8NEF3 446 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 DPF2Q92785 391 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 CELF1Q92879 486 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms