RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ACBD5Q5T8D3 534 aaPredicted RBP14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 RINLQ6ZS11 566 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ZBTB18Q99592 522 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 CCDC90BQ9GZT6 254 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 NDE1Q9NXR1 346 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ZNF263O14978 683 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 PTK2Q05397 1052 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ANKRD36BP1Q96IX9 119 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ARMCX3Q9UH62 379 aaPredicted RBP14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 G3BP2Q9UN86 482 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 PLAAQ9Y263 795 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ABCC1P33527 1531 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ME3Q16798 604 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 THOC1Q96FV9 657 aaKnown RBP14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 ATP11BQ9Y2G3 1177 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 COL4A3BPQ9Y5P4 624 aa14.21□□□□□ -0.13
SRGAP3-201ENST00000360413 H7C0C1 242 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 UFL1O94874 794 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 ECEL1O95672 775 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 SCG2P13521 617 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 ATP5OP48047 213 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 CUL1Q13616 776 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 DDX42Q86XP3 938 aaKnown RBP eCLIP14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 TRAF3IP3Q9Y228 551 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 TBC1D23Q9NUY8 699 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 ARHGEF11O15085 1522 aa14.21□□□□□ -0.14
SRGAP3-201ENST00000360413 CFAP73A6NFT4 308 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 ZBTB22O15209 634 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 MESDQ14696 234 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 CHCHD3Q9NX63 227 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 ADD3Q9UEY8 706 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 COPB1P53618 953 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 CUEDC2Q9H467 287 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 SGSM2O43147 1006 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 SURF1Q15526 300 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TRAF7Q6Q0C0 670 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 FAM227BQ96M60 508 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TLK1Q9UKI8 766 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 ACTN1P12814 892 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 EMBQ6PCB8 327 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 DPP8Q6V1X1 898 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 APPBP2Q92624 585 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 GGCXP38435 758 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 POLGP54098 1239 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TEDDM1Q5T9Z0 273 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 PBKQ96KB5 322 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 UIMC1Q96RL1 719 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TSTA3Q13630 321 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 LARGE2Q8N3Y3 721 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TDRD7Q8NHU6 1098 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 SPTLC3Q9NUV7 552 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 SOWAHDA6NJG2 315 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 FAM178BQ8IXR5 827 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 VPS39Q96JC1 886 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TESK2Q96S53 571 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 EPAS1Q99814 870 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 KIF9Q9HAQ2 790 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 BATF3Q9NR55 127 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 NFU1Q9UMS0 254 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 TRIM33Q9UPN9 1127 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 PLXNC1O60486 1568 aa14.2□□□□□ -0.14
SRGAP3-201ENST00000360413 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 OCRLQ01968 901 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 RNF14Q9UBS8 474 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 NUP160Q12769 1436 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 ANXA13P27216 316 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 SPARCL1Q14515 664 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 NRBP2Q9NSY0 501 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 DNAJC17Q9NVM6 304 aaKnown RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 PPARGC1AQ9UBK2 798 aaKnown RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 SUN2Q9UH99 717 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 GOLGA8TH3BQL2 631 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 GOLGA8HP0CJ92 632 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 OTUD7AQ8TE49 926 aaPredicted RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 E2F6O75461 281 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 MRPL47Q9HD33 250 aaKnown RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 GMNCA6NCL1 334 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 RPN1P04843 607 aaKnown RBP14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 MYL10Q9BUA6 226 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 DIABLOQ9NR28 239 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 GSNP06396 782 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 THAP11Q96EK4 314 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 SH3TC1Q8TE82 1336 aa14.19□□□□□ -0.14
SRGAP3-201ENST00000360413 TAC1P20366 129 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 THOC5Q13769 683 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 SLC44A4Q53GD3 710 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 MYSM1Q5VVJ2 828 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 NUDT18Q6ZVK8 323 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 USP28Q96RU2 1077 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 VPS54Q9P1Q0 977 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms