RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MED7O43513 233 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 NCF2P19878 526 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 ZBTB41Q5SVQ8 909 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 DNAJC24Q6P3W2 148 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 ACRBPQ8NEB7 543 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 TBCKQ8TEA7 893 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 CALN1Q9BXU9 219 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 FOXP1Q9H334 677 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 A0A087WWV3 80 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 SOWAHDA6NJG2 315 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 EPHB4P54760 987 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 ADCK5Q3MIX3 580 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 C11orf57Q6ZUT1 292 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 TRIM42Q8IWZ5 723 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 SLC7A3Q8WY07 619 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 CEP170P1Q96L14 293 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 TLK1Q9UKI8 766 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 SOX5P35711 763 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 DHTKD1Q96HY7 919 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 INTUQ9ULD6 942 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 DDIT3P35638 169 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 MAP3K15Q6ZN16 1313 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 CUEDC2Q9H467 287 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 NEO1Q92859 1461 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 E2F5Q15329 346 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 HSPH1Q92598 858 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 MT-ND3P03897 115 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 COA7Q96BR5 231 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 ZSCAN20P17040 1043 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-202ENST00000359082 MTERF2Q49AM1 385 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 ZNF449Q6P9G9 518 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 EXT2Q93063 718 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 THEGQ9P2T0 379 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 PCDHA5Q9Y5H7 936 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 CCDC138Q96M89 665 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 INPP5FQ9Y2H2 1132 aa19.87■□□□□ 0.77
SHANK1-202ENST00000359082 SOS2Q07890 1332 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-202ENST00000359082 HEXIM2Q96MH2 286 aaKnown RBP19.86■□□□□ 0.77
SHANK1-202ENST00000359082 NHEJ1Q9H9Q4 299 aaPredicted RBP19.86■□□□□ 0.77
SHANK1-202ENST00000359082 MLH3Q9UHC1 1453 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 EEPD1Q7L9B9 569 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 TCP11Q8WWU5 503 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 PNMA2Q9UL42 364 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 PGRMC1O00264 195 aaKnown RBP19.86■□□□□ 0.77
SHANK1-202ENST00000359082 SNAP25P60880 206 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 SLAIN2Q9P270 581 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 CFLARO15519 480 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 DPCR1Q3MIW9 517 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 IL17REQ8NFR9 667 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 XDHP47989 1333 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 UBE2SQ16763 222 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 GSDMAQ96QA5 445 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.86■□□□□ 0.77
SHANK1-202ENST00000359082 ZWILCHQ9H900 591 aa19.86■□□□□ 0.77
SHANK1-202ENST00000359082 CRKLP46109 303 aaKnown RBP19.85■□□□□ 0.77
SHANK1-202ENST00000359082 ART3Q13508 389 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 MAN2A1Q16706 1144 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 ZBBXA8MT70 800 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 YWHAHQ04917 246 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-202ENST00000359082 UBE3CQ15386 1083 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 AP1ARQ63HQ0 302 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 PIP4K2CQ8TBX8 421 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 AP1M1Q9BXS5 423 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 PZPP20742 1482 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 EEF1B2P24534 225 aaKnown RBP19.85■□□□□ 0.77
SHANK1-202ENST00000359082 RABGGTAQ92696 567 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 SPATA17Q96L03 361 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 FAM8A1Q9UBU6 413 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 DBNDD1Q9H9R9 158 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 SUCLA2Q9P2R7 463 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-202ENST00000359082 PRPSAP2O60256 369 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 SLC7A5Q01650 507 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 DHX9Q08211 1270 aaKnown RBP19.85■□□□□ 0.77
SHANK1-202ENST00000359082 MKRN3Q13064 507 aaKnown RBP19.85■□□□□ 0.77
SHANK1-202ENST00000359082 SLC39A14Q15043 492 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 BANK1Q8NDB2 785 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 TMEM206Q9H813 350 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 ATP8B3O60423 1300 aa19.85■□□□□ 0.77
SHANK1-202ENST00000359082 BNIP3LO60238 219 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 PFDN1O60925 122 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 PCP11498 1178 aaKnown RBP19.84■□□□□ 0.77
SHANK1-202ENST00000359082 ANXA13P27216 316 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 C10orf76Q5T2E6 689 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 SIX6OS1Q8N1H7 587 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 TTC1Q99614 292 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 PCDHA13Q9Y5I0 950 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 DISP1Q96F81 1524 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 TTI1O43156 1089 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 MAML1Q92585 1016 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 SPTLC3Q9NUV7 552 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 USP14P54578 494 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 TRMT10CQ7L0Y3 403 aaKnown RBP19.84■□□□□ 0.77
SHANK1-202ENST00000359082 AK8Q96MA6 479 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 NUDCD1Q96RS6 583 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 FAM135BQ49AJ0 1406 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms