RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 OTULINQ96BN8 352 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 MOSPD1Q9UJG1 213 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 PTPREP23469 700 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 OCA2Q04671 838 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 CERKLQ49MI3 558 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 C11orf57Q6ZUT1 292 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 ATP6V0A1Q93050 837 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 PARD6BQ9BYG5 372 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 LZTS1Q9Y250 596 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 CSADQ9Y600 493 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 MAPK13O15264 365 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 BCAMP50895 628 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 EPHB1P54762 984 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 TFAMQ00059 246 aaKnown RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 NUGGCQ68CJ6 796 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 FRA10AC1Q70Z53 315 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 UPF3AQ9H1J1 476 aaKnown RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 NHEJ1Q9H9Q4 299 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 FAM8A1Q9UBU6 413 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 PGRMC1O00264 195 aaKnown RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 MIS12Q9H081 205 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 JRKLQ9Y4A0 524 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 CMA1P23946 247 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 BBS5Q8N3I7 341 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 MRPL11Q9Y3B7 192 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 TNKSO95271 1327 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ANP32DO95626 131 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 OCM2P0CE71 109 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 OCMP0CE72 109 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 DDIT3P35638 169 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PSMC2P35998 433 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 GCKRQ14397 625 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 RWDD4Q6NW29 188 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 GANCQ8TET4 914 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 EIF3CQ99613 913 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 LMCD1Q9NZU5 365 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF711Q9Y462 761 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 AOX1Q06278 1338 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 RASGRF2O14827 1237 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ARHGEF9O43307 516 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PYGLP06737 847 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 CCDC159P0C7I6 412 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PPARGC1AQ9UBK2 798 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 NFU1Q9UMS0 254 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 YTHDC2Q9H6S0 1430 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 HMGB1P1B2RPK0 211 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 MAP3K7CLP57077 242 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 RBM6P78332 1123 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 DR1Q01658 176 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 GIPC2Q8TF65 315 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF577Q9BSK1 485 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 GYG2O15488 501 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 OR6B2Q6IFH4 312 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 DNAJC24Q6P3W2 148 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 GSPT2Q8IYD1 628 aaKnown RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PYROXD1Q8WU10 500 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 KMT5AQ9NQR1 393 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 GTSE1Q9NYZ3 720 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 PCDHA13Q9Y5I0 950 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 DPCR1Q3MIW9 517 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 BEND6Q5SZJ8 279 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ABI1Q8IZP0 508 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 L3MBTL1Q9Y468 752 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ADCY9O60503 1353 aa12.06□□□□□ -0.48
COL11A1-202ENST00000358392 ARL4AP40617 200 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 CRLF3Q8IUI8 442 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 PLAAQ9Y263 795 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 NPATQ14207 1427 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 A0A087WUV0 522 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 INO80B-WBP1J3KQ70 363 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 SERPINI2O75830 405 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 FAF2Q96CS3 445 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 PPP1R36Q96LQ0 422 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 INO80BQ9C086 356 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 SUPT3HO75486 399 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 TRIM37O94972 964 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 CA4P22748 312 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 KLC3Q6P597 504 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 RNF207Q6ZRF8 634 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 TAGAPQ8N103 731 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 SYT2Q8N9I0 419 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 FMO2Q99518 471 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 FGFR1OP2Q9NVK5 253 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 ZSCAN9O15535 394 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-202ENST00000358392 ERFP50548 548 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 MECOMQ03112 1051 aa12.05□□□□□ -0.48
COL11A1-202ENST00000358392 FAM47EQ6ZV65 393 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms