RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ATP6V0A1Q93050 837 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 SLC12A7Q9Y666 1083 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 EMSYQ7Z589 1322 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 SLC27A2O14975 620 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-204ENST00000356316 ICAM3P32942 547 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 LIFRP42702 1097 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 WDR5P61964 334 aaKnown RBP12.27□□□□□ -0.45
CAPN3-204ENST00000356316 MRPS9P82933 396 aaKnown RBP12.27□□□□□ -0.45
CAPN3-204ENST00000356316 RBL2Q08999 1139 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 AAK1Q2M2I8 961 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.45
CAPN3-204ENST00000356316 CTAGE1Q96RT6 745 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 C16orf70Q9BSU1 422 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
CAPN3-204ENST00000356316 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-204ENST00000356316 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 RFXAPO00287 272 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 PIK3CDO00329 1044 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-204ENST00000356316 NBNO60934 754 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 CXCL10P02778 98 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 LGALS2P05162 132 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-204ENST00000356316 TAP1Q03518 808 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 METTL7BQ6UX53 244 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 SERINC5Q86VE9 423 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
CAPN3-204ENST00000356316 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
CAPN3-204ENST00000356316 CDHR1Q96JP9 859 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 INPP4AQ96PE3 977 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-204ENST00000356316 RAD9AQ99638 391 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 SENP7Q9BQF6 1050 aa12.26□□□□□ -0.45
CAPN3-204ENST00000356316 LSG1Q9H089 658 aaKnown RBP12.26□□□□□ -0.45
CAPN3-204ENST00000356316 XIRP2A4UGR9 3374 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 LGR5O75473 907 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 PLEKHA8P1O95397 391 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 AMHP03971 560 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 SMIM10L2AP0DMW4 78 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 SMIM10L2BP0DMW5 78 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
CAPN3-204ENST00000356316 POU3F3P20264 500 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-204ENST00000356316 GPNMBQ14956 572 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 UTP14CQ5TAP6 766 aaKnown RBP12.25□□□□□ -0.45
CAPN3-204ENST00000356316 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-204ENST00000356316 CMTR1Q8N1G2 835 aaKnown RBP12.25□□□□□ -0.45
CAPN3-204ENST00000356316 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 GPR20Q99678 358 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 EHMT1Q9H9B1 1298 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 MTCH2Q9Y6C9 303 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 FRMPD4Q14CM0 1322 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 TET1Q8NFU7 2136 aa12.25□□□□□ -0.45
CAPN3-204ENST00000356316 MEIS2O14770 477 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 GJB5O95377 273 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 RXRAP19793 462 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 SP4Q02446 784 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 TRIM71Q2Q1W2 868 aaKnown RBP12.24□□□□□ -0.45
CAPN3-204ENST00000356316 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 BCAS3Q9H6U6 928 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 INSL6Q9Y581 213 aa12.24□□□□□ -0.45
CAPN3-204ENST00000356316 KAT6AQ92794 2004 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 MAFGO15525 162 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 TREHO43280 583 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 CAND2O75155 1236 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 DEFB103AP81534 67 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 HIC1Q14526 733 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 BMP2KLQ5H9B9 411 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 FAM117BQ6P1L5 589 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 TMCO2Q7Z6W1 182 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-204ENST00000356316 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 RAB11FIP4Q86YS3 637 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 ADAMTS19Q8TE59 1207 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 SEPT8Q92599 483 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 WNT8BQ93098 351 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 GPRASP2Q96D09 838 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 LRRC2Q9BYS8 371 aa12.23□□□□□ -0.45
CAPN3-204ENST00000356316 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
CAPN3-204ENST00000356316 SPTBN5Q9NRC6 3674 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms