RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SAR1BQ9Y6B6 198 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 CASZ1Q86V15 1759 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 TTC36A6NLP5 189 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 SHOX2O60902 331 aaPredicted RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 UFL1O94874 794 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 PLEKP08567 350 aaPredicted RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 TM4SF1P30408 202 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 CDK8P49336 464 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 SMTNP53814 917 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 HERVK_113P62684 666 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 TTI2Q6NXR4 508 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 C3orf20Q8ND61 904 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 JAKMIP2Q96AA8 810 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 CCT8L2Q96SF2 557 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 DUSP9Q99956 384 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 ZNHIT6Q9NWK9 470 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 A0A1B0GUL6 1792 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 RWDD2BP57060 319 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 RNASE9P60153 205 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 TRIM14Q14142 442 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 LRRC41Q15345 812 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 TSEN2Q8NCE0 465 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 CCDC43Q96MW1 224 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 TRIM9Q9C026 710 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 GPCPD1Q9NPB8 672 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 A1CFQ9NQ94 594 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 KBTBD4Q9NVX7 518 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 EHD2Q9NZN4 543 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 POTEMA6NI47 508 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 SLURP2P0DP57 97 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 MCM3P25205 808 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 RPUSD2Q8IZ73 545 aaKnown RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 GIMAP8Q8ND71 665 aaPredicted RBP10.31□□□□□ -0.76
SMG6-202ENST00000354901 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 P2RX5Q93086 422 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 VIPAS39Q9H9C1 493 aa10.31□□□□□ -0.76
SMG6-202ENST00000354901 RHOBTB3O94955 611 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 NEK8Q86SG6 692 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 NLRP14Q86W24 1093 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 FAM228AQ86W67 206 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 FUKQ8N0W3 1084 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 CDK5RAP3Q96JB5 506 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 MMRN2Q9H8L6 949 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 QTRT2Q9H974 415 aaKnown RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 C6orf50Q9HD87 102 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 SH3GLB2Q9NR46 395 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 PALM3A6NDB9 673 aaPredicted RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 M0R2N6 131 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 EEF1GP26641 437 aaKnown RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 TNNI2P48788 182 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 DNM2P50570 870 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 ENOX2Q16206 610 aaKnown RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 WDR93Q6P2C0 686 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 ZNF804AQ7Z570 1209 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 CCSER1Q9C0I3 900 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 TBC1D7Q9P0N9 293 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 DMGDHQ9UI17 866 aaKnown RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 GOLGA8KD6RF30 607 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 MARCH6O60337 910 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 TDP2O95551 362 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 GRIK3Q13003 919 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 CCDC96Q2M329 555 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 MFSD14BQ5SR56 506 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 CFAP58Q5T655 872 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 CCNI2Q6ZMN8 369 aaPredicted RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 ZNF507Q8TCN5 953 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 BORCS6Q96GS4 357 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SMG6-202ENST00000354901 NHEJ1Q9H9Q4 299 aaPredicted RBP10.3□□□□□ -0.76
SMG6-202ENST00000354901 C6orf229H3BNL8 230 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 RTN2O75298 545 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 CCNE1P24864 410 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
SMG6-202ENST00000354901 PDS5AQ29RF7 1337 aaKnown RBP10.29□□□□□ -0.76
SMG6-202ENST00000354901 TBC1D1Q86TI0 1168 aaPredicted RBP10.29□□□□□ -0.76
SMG6-202ENST00000354901 REXO1Q8N1G1 1221 aaKnown RBP10.29□□□□□ -0.76
SMG6-202ENST00000354901 GLIS3Q8NEA6 775 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
SMG6-202ENST00000354901 CALML4Q96GE6 196 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 THAP9Q9H5L6 903 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 HAUS4Q9H6D7 363 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 KANSL2Q9H9L4 492 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 CAPN11Q9UMQ6 739 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 KRT86O43790 486 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 DIAPH2O60879 1101 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 TUBBP07437 444 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 LDHCP07864 332 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 NR1D1P20393 614 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 GPSM2P81274 684 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 UBE2SQ16763 222 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 ZNF772Q68DY9 489 aaPredicted RBP10.29□□□□□ -0.76
SMG6-202ENST00000354901 ARMCX6Q7L4S7 300 aa10.29□□□□□ -0.76
SMG6-202ENST00000354901 KRT25Q7Z3Z0 450 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms