RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 SLC18A3Q16572 532 aa13.45□□□□□ -0.26
TRERF1-202ENST00000354325 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
TRERF1-202ENST00000354325 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
TRERF1-202ENST00000354325 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 PPP1R12BO60237 982 aaPredicted RBP13.44□□□□□ -0.26
TRERF1-202ENST00000354325 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
TRERF1-202ENST00000354325 SLC1A4P43007 532 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 MS4A14Q96JA4 679 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 FMO2Q99518 471 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 TRIM9Q9C026 710 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 FRMD3A2A2Y4 597 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 MMEP08473 750 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 GNA11P29992 359 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 GFPT1Q06210 699 aaPredicted RBP13.44□□□□□ -0.26
TRERF1-202ENST00000354325 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 BIRC2Q13490 618 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
TRERF1-202ENST00000354325 CCT6BQ92526 530 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 TNFRSF25Q93038 417 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 OSBPL7Q9BZF2 842 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 SLC12A6Q9UHW9 1150 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 CCDC189A1A4V9 331 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 IRS4O14654 1257 aaPredicted RBP13.44□□□□□ -0.26
TRERF1-202ENST00000354325 MARCH6O60337 910 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 BTG4Q9NY30 223 aa13.44□□□□□ -0.26
TRERF1-202ENST00000354325 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 FKBP3Q00688 224 aaKnown RBP13.43□□□□□ -0.26
TRERF1-202ENST00000354325 TSNAXIP1Q2TAA8 658 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 NAIF1Q69YI7 327 aaPredicted RBP13.43□□□□□ -0.26
TRERF1-202ENST00000354325 UNC13DQ70J99 1090 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 TRPM8Q7Z2W7 1104 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 RUNDC3BQ96NL0 473 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 ARFGEF2Q9Y6D5 1785 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 HSPA6P17066 643 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 USP11P51784 963 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 LCORLQ8N3X6 602 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 KLHL29Q96CT2 875 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 VCXQ9H320 206 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRERF1-202ENST00000354325 NWD2Q9ULI1 1742 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 LRRD1A4D1F6 860 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 AGTP01019 485 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 PMS1P54277 932 aaKnown RBP13.43□□□□□ -0.26
TRERF1-202ENST00000354325 CENPPQ6IPU0 288 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
TRERF1-202ENST00000354325 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 EBF2Q9HAK2 575 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
TRERF1-202ENST00000354325 ATP5HO75947 161 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 IL2RBP14784 551 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 PLCG1P19174 1290 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 TBC1D1Q86TI0 1168 aaPredicted RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 FAXDC2Q96IV6 333 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 INPP4AQ96PE3 977 aaPredicted RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 COL4A3BPQ9Y5P4 624 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 RGPD8O14715 1765 aaPredicted RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 hCG_1642624A0A1W2PR95 340 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 FAM187AA6NFU0 413 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 TSPY2A6NKD2 308 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 ZNF263O14978 683 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 KLRC4O43908 158 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 ANP32DO95626 131 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 PLEKP08567 350 aaPredicted RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 DRD4P21917 467 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 KLK7P49862 253 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 RNASE9P60153 205 aaKnown RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 ERMARDQ5T6L9 678 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 TBC1D5Q92609 795 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 NLRC4Q9NPP4 1024 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 SMARCAL1Q9NZC9 954 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 CORO1CQ9ULV4 474 aaPredicted RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 CNTNAP5Q8WYK1 1306 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 DNM1LO00429 736 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 MYOCDQ8IZQ8 938 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 MIGA1Q8NAN2 632 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 ANKS1AQ92625 1134 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 MTRQ99707 1265 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
TRERF1-202ENST00000354325 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
TRERF1-202ENST00000354325 STXBP3O00186 592 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 TRAF5O00463 557 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 TMOD1P28289 359 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 SETDB1Q15047 1291 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PDCD2Q16342 344 aaPredicted RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 TLDC1Q6P9B6 456 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PLIN2Q99541 437 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PHF20L1A8MW92 1017 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PPIP5K2O43314 1243 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms