RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SLC35G2Q8TBE7 412 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 DCAF4Q8WV16 495 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 RUNDC1Q96C34 613 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 CHST7Q9NS84 486 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 B4GALT6Q9UBX8 382 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 CDC23Q9UJX2 597 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 NPFFR2Q9Y5X5 522 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GOLGA6CA6NDK9 693 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GOLGA6BA6NDN3 693 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 F8W735 103 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 PPP1R11O60927 126 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 NPTXRO95502 500 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GOLGA6DP0CG33 693 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 AMPD1P23109 780 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 C1QTNF8P60827 252 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 NRG1Q02297 640 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 NMIQ13287 307 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 PICALMQ13492 652 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 MINDY4Q4G0A6 757 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 RTP2Q5QGT7 225 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 C1orf228Q6PIY5 440 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 DDX53Q86TM3 631 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 LMBR1Q8WVP7 490 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 DPF3Q92784 378 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 SMARCC1Q92922 1105 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 RAB24Q969Q5 203 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 EIF2AK1Q9BQI3 630 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 PLVAPQ9BX97 442 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 SLC12A9Q9BXP2 914 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 CELF4Q9BZC1 486 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 CD244Q9BZW8 370 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 BHMT2Q9H2M3 363 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ACSS3Q9H6R3 686 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GOLGA6AQ9NYA3 693 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 MAP3K20Q9NYL2 800 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 TPX2Q9ULW0 747 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 A0A0U1RQG5 324 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 C1QTNF9BB2RNN3 333 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 AURKAO14965 403 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ALDH2P05091 517 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 LPLP06858 475 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ZBTB48P10074 688 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 RECQLP46063 649 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 LSSP48449 732 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 TNK2Q07912 1038 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GBX1Q14549 363 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 TERF2Q15554 542 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ANGEL2Q5VTE6 544 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 TEX2Q8IWB9 1127 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ANKRD42Q8N9B4 389 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 SH3RF2Q8TEC5 729 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 POF1BQ8WVV4 589 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 HEXIM2Q96MH2 286 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 HDAC8Q9BY41 377 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ANO3Q9BYT9 981 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 QRSL1Q9H0R6 528 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ATXN3LQ9H3M9 355 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 C1GALT1Q9NS00 363 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 INVSQ9Y283 1065 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ANKRD6Q9Y2G4 727 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 BACE2Q9Y5Z0 518 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 RPS6KL1Q9Y6S9 549 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 BCORL1Q5H9F3 1711 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 BCL9LQ86UU0 1499 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GOLGA8AA7E2F4 631 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GOLGA8BA8MQT2 603 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 K7ESF4 209 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RNF225M0QZC1 329 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SIGLEC6O43699 453 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 KDM1AO60341 852 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RBP3P10745 1247 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 NAT2P11245 290 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 BCL6P41182 706 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 HALP42357 657 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SMAD3P84022 425 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 PURAQ00577 322 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CHAF1AQ13111 956 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 PAK1Q13153 545 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 KIR3DS1Q14943 382 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SMAD2Q15796 467 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CT83Q5H943 113 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 LILRA6Q6PI73 481 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 UNQ6494/PRO21346Q6UXR6 183 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SVOPQ8N4V2 548 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CHAMP1Q96JM3 812 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CENPOQ9BU64 300 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ZMAT4Q9H898 229 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 PLCB1Q9NQ66 1216 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CATSPERZQ9NTU4 200 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ZKSCAN5Q9Y2L8 839 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ST14Q9Y5Y6 855 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 MORC2Q9Y6X9 1032 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 BSNQ9UPA5 3926 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 AQP7O14520 342 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TBX3O15119 743 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TCEA3O75764 348 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RHCEP18577 417 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 BDNFP23560 247 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 FLT3P36888 993 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CAP2P40123 477 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms