RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 EMILIN3Q9NT22 766 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 ODF2LQ9ULJ1 636 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 CAPN11Q9UMQ6 739 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 TRAF3IP3Q9Y228 551 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 N4BP3O15049 544 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 MED24O75448 989 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 PTPRAP18433 802 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 MYBPC2Q14324 1141 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 FAM26FQ5R3K3 315 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 KCNK18Q7Z418 384 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 KLRG1Q96E93 195 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 TTYH3Q9C0H2 523 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 SEMA6BQ9H3T3 888 aa11.96□□□□□ -0.49
EPB41-203ENST00000349460 OTOFQ9HC10 1997 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 SCN4AP35499 1836 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 VCAM1P19320 739 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 INPP5BP32019 993 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 ZNF131P52739 623 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 MEA1Q16626 185 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 USH1GQ495M9 461 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.5
EPB41-203ENST00000349460 KIFC2Q96AC6 838 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 FEZ1Q99689 392 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 TBC1D22BQ9NU19 505 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 PANK4Q9NVE7 773 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 DBR1Q9UK59 544 aaKnown RBP11.96□□□□□ -0.5
EPB41-203ENST00000349460 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 KIAA1024Q9UPX6 916 aa11.96□□□□□ -0.5
EPB41-203ENST00000349460 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 SCP2P22307 547 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 SNRPFP62306 86 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 FKBP3Q00688 224 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 ALCAMQ13740 583 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 MAN2A1Q16706 1144 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 LBX2Q6XYB7 198 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 LRRC55Q6ZSA7 311 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 MIGA2Q7L4E1 593 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 NACC1Q96RE7 527 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 SRRTQ9BXP5 876 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 JADE2Q9NQC1 790 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 CGNQ9P2M7 1197 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 MYO1AQ9UBC5 1043 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 COL11A1P12107 1806 aaPredicted RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 TEX33O43247 280 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 GYPCP04921 128 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 TNNT1P13805 278 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 GUCY2CP25092 1073 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 DSG3P32926 999 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 ZNF76P36508 570 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 STX17P56962 302 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 RASSF7Q02833 373 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 EIF2AK1Q9BQI3 630 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 TEKT3Q9BXF9 490 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 SPON1Q9HCB6 807 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 PICK1Q9NRD5 415 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 PMS1P54277 932 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 GIT2Q14161 759 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 ARSHQ5FYA8 562 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 CEP135Q66GS9 1140 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 MTERF4Q7Z6M4 381 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 REXO1L1PQ8IX06 675 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 TUBGCP2Q9BSJ2 902 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 NUCKS1Q9H1E3 243 aaKnown RBP11.95□□□□□ -0.5
EPB41-203ENST00000349460 KCTD10Q9H3F6 313 aa11.95□□□□□ -0.5
EPB41-203ENST00000349460 ATP8B3O60423 1300 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 VWA5AO00534 786 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 PDXKO00764 312 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
EPB41-203ENST00000349460 ENPEPQ07075 957 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 CYP26C1Q6V0L0 522 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 GPBP1Q86WP2 473 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.94□□□□□ -0.5
EPB41-203ENST00000349460 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 SYN2Q92777 582 aaPredicted RBP11.94□□□□□ -0.5
EPB41-203ENST00000349460 CNOT6LQ96LI5 555 aaKnown RBP11.94□□□□□ -0.5
EPB41-203ENST00000349460 COL4A3BPQ9Y5P4 624 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 LOC102724159A0A0B4J2E5 919 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 POTEB3A0JP26 581 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 POTECB2RU33 542 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 SFNP31947 248 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 RBL2Q08999 1139 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 PWP2Q15269 919 aaKnown RBP11.94□□□□□ -0.5
EPB41-203ENST00000349460 LRCH2Q5VUJ6 765 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 POTEBQ6S5H4 581 aa11.94□□□□□ -0.5
EPB41-203ENST00000349460 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms