RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 MT-ND3P03897 115 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 ROR2Q01974 943 aaKnown RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 SGO2Q562F6 1265 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 JADE1Q6IE81 842 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 AHCYL1O43865 530 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 ATF7P17544 494 aaPredicted RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 TRIM16LQ309B1 348 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 MYOCDQ8IZQ8 938 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 GABPB2Q8TAK5 448 aaPredicted RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 V9GY48 417 aaPredicted RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 GPAA1O43292 621 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 KDM7AQ6ZMT4 941 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 TTC16Q8NEE8 873 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■■■■■ 63
TRIO-202ENST00000344204 ING2Q9H160 280 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 PGM1P36871 562 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 RBM5P52756 815 aaKnown RBP eCLIP14.69□□□□□ -0.062e-9■■■□□ 15.2
TRIO-202ENST00000344204 COPS2P61201 443 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 MED21Q13503 144 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 MARK3P27448 753 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 CUEDC2Q9H467 287 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 ARMCX3Q9UH62 379 aaPredicted RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 ARHGAP31Q2M1Z3 1444 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 GJA8P48165 433 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 NDEL1Q9GZM8 345 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 RAB20Q9NX57 234 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 CCDC88CQ9P219 2028 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 ESYT3A0FGR9 886 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 ATP1A1P05023 1023 aaKnown RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 GSTA1P08263 222 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 UBTFL6P0CB48 400 aaPredicted RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 RPGRQ92834 1020 aaKnown RBP14.69□□□□□ -0.06
TRIO-202ENST00000344204 FBXL5Q9UKA1 691 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 LDHAL6AQ6ZMR3 332 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 MAD1L1Q9Y6D9 718 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 SYNGAP1Q96PV0 1343 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 DMPKQ09013 629 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 KRT81Q14533 505 aa14.69□□□□□ -0.06
TRIO-202ENST00000344204 COBLO75128 1261 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 SERPINB1P30740 379 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 FAM47EQ6ZV65 393 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 SAMD9Q5K651 1589 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 RSPH10B2B2RC85 870 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 DEAF1O75398 565 aaPredicted RBP14.68□□□□□ -0.06
TRIO-202ENST00000344204 RSPH10BP0C881 870 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 DDIT3P35638 169 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 ITFG2Q969R8 447 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 CEP19Q96LK0 163 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 WARS2Q9UGM6 360 aaKnown RBP14.68□□□□□ -0.06
TRIO-202ENST00000344204 A0A1W2PP64 1363 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 RASA4BC9J798 803 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 RASA4O43374 803 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 KCNB1Q14721 858 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 STRIP2Q9ULQ0 834 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 E7ENQ6 273 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 TRMT10CQ7L0Y3 403 aaKnown RBP14.68□□□□□ -0.06
TRIO-202ENST00000344204 SRRM1Q8IYB3 904 aaKnown RBP14.68□□□□□ -0.06
TRIO-202ENST00000344204 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 SPHKAPQ2M3C7 1700 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 YWHAGP61981 247 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRIO-202ENST00000344204 ASPHQ12797 758 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 PGBD1Q96JS3 809 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 CHN1P15882 459 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 SCYL1Q96KG9 808 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 ZNF518AQ6AHZ1 1483 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 CCDC88AQ3V6T2 1871 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 MAP4P27816 1152 aaKnown RBP14.68□□□□□ -0.06
TRIO-202ENST00000344204 KLC3Q6P597 504 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 G2E3Q7L622 706 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 GORASP1Q9BQQ3 440 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 ZSCAN29Q8IWY8 852 aaPredicted RBP14.68□□□□□ -0.06
TRIO-202ENST00000344204 GOLPH3LQ9H4A5 285 aa14.68□□□□□ -0.06
TRIO-202ENST00000344204 HSPA8P11142 646 aaKnown RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 TMOD1P28289 359 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 CEP55Q53EZ4 464 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 ZKSCAN4Q969J2 545 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 MYL10Q9BUA6 226 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 PARVBQ9HBI1 364 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 ATXN2Q99700 1313 aaKnown RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 E9PCH4 1651 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 IQCB1Q15051 598 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 CCNI2Q6ZMN8 369 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 GRAMD1CQ8IYS0 662 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 STRNO43815 780 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 TOM1L1O75674 476 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 NOC2LQ9Y3T9 749 aaKnown RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 ZNF658Q5TYW1 1059 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 KRT25Q7Z3Z0 450 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 CABP7Q86V35 215 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 VPS54Q9P1Q0 977 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 BAG5Q9UL15 447 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 GSTO1P78417 241 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 PPP2R5CQ13362 524 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 MAN2A1Q16706 1144 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 KAZNQ674X7 775 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms