RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 PALMDQ9NP74 551 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 DOCK6Q96HP0 2047 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ATP1A3P13637 1013 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 NELFEP18615 380 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RPL26P61254 145 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 HABP4Q5JVS0 413 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 C11orf57Q6ZUT1 292 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TOGARAM2Q6ZUX3 1019 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 FBF1Q8TES7 1133 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TBC1D5Q92609 795 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PDLIM1O00151 329 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 KITP10721 976 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ORC2Q13416 577 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 KIAA2026Q5HYC2 2103 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CNTROBQ8N137 903 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ARHGAP24Q8N264 748 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CDC5LQ99459 802 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 UBXN6Q9BZV1 441 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ORC3Q9UBD5 711 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 EMILIN1Q9Y6C2 1016 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 STIM1Q13586 685 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ADCK5Q3MIX3 580 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 EFHD2Q96C19 240 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RUNDC3BQ96NL0 473 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 KDM3BQ7LBC6 1761 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 UBXN2AP68543 259 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 MTMR3Q13615 1198 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 GRAMD1AQ96CP6 724 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TAF5LO75529 589 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CTNNA1P35221 906 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PCYT1AP49585 367 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 FAM182BQ5T319 152 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 LRGUKQ96M69 825 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 HAUS2Q9NVX0 235 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ZNF76P36508 570 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ZYXQ15942 572 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ADALQ6DHV7 355 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 KMT2EQ8IZD2 1858 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PLA2G4AP47712 749 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ADCY2Q08462 1091 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 C2orf54Q08AI8 447 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 VPS37DQ86XT2 251 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TAF6LQ9Y6J9 622 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 NPATQ14207 1427 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 WTIPA6NIX2 430 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 GKAP1Q5VSY0 366 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 C11orf74Q86VG3 221 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PALM2Q8IXS6 379 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 EPS15P42566 896 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 VPS37AQ8NEZ2 397 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TBK1Q9UHD2 729 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 SPDYE2BA6NHP3 402 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 SPDYE5A6NIY4 337 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 GFPT2O94808 682 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 SPDYE6P0CI01 402 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TROVE2P10155 538 aaKnown RBP eCLIP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 LRRC14Q15048 493 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 SPDYE2Q495Y8 402 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CNNM1Q9NRU3 951 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 LAMB2P55268 1798 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 BCORQ6W2J9 1755 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 UAP1L1Q3KQV9 507 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PDXDC1Q6P996 788 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CD53P19397 219 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 BYSLQ13895 437 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CAPRIN2Q6IMN6 1127 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 NDUFAF2Q8N183 169 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PROM2Q8N271 834 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 KLF6Q99612 283 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ESPL1Q14674 2120 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RGS12O14924 1447 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 E7EVH7 732 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ABCD1P33897 745 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PAFAH1B1P43034 410 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 MAGEA8P43361 318 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TRAF7Q6Q0C0 670 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TOR3AQ9H497 397 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 IL1RAPL1Q9NZN1 696 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TRIM27P14373 513 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 FAPQ12884 760 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 FRA10AC1Q70Z53 315 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CERKQ8TCT0 537 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 OLFM3Q96PB7 478 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 SAMSN1Q9NSI8 373 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 ODF2LQ9ULJ1 636 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 DOCK3Q8IZD9 2030 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RANBP6O60518 1105 aaKnown RBP3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CASP14P31944 242 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TFCP2Q12800 502 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 FLOT2Q14254 428 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RAB3IL1Q8TBN0 382 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RAPGEF5Q92565 580 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 SPDL1Q96EA4 605 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 TTC21BQ7Z4L5 1316 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 PLCB3Q01970 1234 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RASGRP4Q8TDF6 673 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 DIABLOQ9NR28 239 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 RHBDL2Q9NX52 303 aa3.85□□□□□ -1.79
SYNE1-201ENST00000341594 CDC23Q9UJX2 597 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms