RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 RNF187Q5TA31 235 aaPredicted RBP11.87□□□□□ -0.51
TPM3-207ENST00000341372 LHX8Q68G74 356 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
TPM3-207ENST00000341372 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
TPM3-207ENST00000341372 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 JAKMIP1Q96N16 626 aaKnown RBP11.87□□□□□ -0.51
TPM3-207ENST00000341372 MYL10Q9BUA6 226 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 PCDH12Q9NPG4 1184 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 BCCIPQ9P287 314 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM3-207ENST00000341372 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 NID2Q14112 1375 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 GPR182O15218 404 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 MSCO60682 206 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 CFHP08603 1231 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
TPM3-207ENST00000341372 BLOC1S2Q6QNY1 142 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 FBXO11Q86XK2 927 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 ANKLE1Q8NAG6 615 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 LZTS2Q9BRK4 669 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 SLC12A7Q9Y666 1083 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 SOWAHBA6NEL2 793 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 PPP1R11O60927 126 aaPredicted RBP11.86□□□□□ -0.51
TPM3-207ENST00000341372 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 PSMA5P28066 241 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 GNAQP50148 359 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 CNTN2Q02246 1040 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
TPM3-207ENST00000341372 DDX20Q9UHI6 824 aaKnown RBP11.86□□□□□ -0.51
TPM3-207ENST00000341372 TNRC18O15417 2968 aaPredicted RBP11.85□□□□□ -0.51
TPM3-207ENST00000341372 CCDC194A0A1B0GVG4 234 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 SEPT4O43236 478 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 DHX16O60231 1041 aaKnown RBP11.85□□□□□ -0.51
TPM3-207ENST00000341372 SEC24BO95487 1268 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 SNAI1O95863 264 aaPredicted RBP11.85□□□□□ -0.51
TPM3-207ENST00000341372 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
TPM3-207ENST00000341372 USH1GQ495M9 461 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 SLC30A10Q6XR72 485 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 TMTC3Q6ZXV5 915 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 KATNBL1Q9H079 304 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
TPM3-207ENST00000341372 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
TPM3-207ENST00000341372 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 STK10O94804 968 aaKnown RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 CPA1P15085 419 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 TRAF1Q13077 416 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 BAATQ14032 418 aaPredicted RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 ARMCX2Q7L311 632 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 PIGSQ96S52 555 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 ASB14A6NK59 587 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 OPLAHO14841 1288 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 PLEKHA8P1O95397 391 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 RXRAP19793 462 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 EVCP57679 992 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 RPS6P62753 249 aaKnown RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 PLEKHG6Q3KR16 790 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 RNF207Q6ZRF8 634 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 MICU3Q86XE3 530 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 SRBD1Q8N5C6 995 aaKnown RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 SAMD3Q8N6K7 520 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 RBM28Q9NW13 759 aaKnown RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.84□□□□□ -0.51
TPM3-207ENST00000341372 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
TPM3-207ENST00000341372 KLF18A0A0U1RQI7 1052 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 ZBTB43O43298 467 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 TFRCP02786 760 aaKnown RBP11.83□□□□□ -0.52
TPM3-207ENST00000341372 CTSHP09668 335 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 EDNRBP24530 442 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 MCCD1P59942 119 aaPredicted RBP11.83□□□□□ -0.52
TPM3-207ENST00000341372 FGD1P98174 961 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 PTK2Q05397 1052 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 SYNE3Q6ZMZ3 975 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 Q6ZUG5 572 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 HOMER1Q86YM7 354 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 CCDC144CPQ8IYA2 1237 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.52
TPM3-207ENST00000341372 ADD3Q9UEY8 706 aaKnown RBP11.83□□□□□ -0.52
TPM3-207ENST00000341372 SLC27A5Q9Y2P5 690 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 GPSM3Q9Y4H4 160 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 ALPK3Q96L96 1907 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 CNTNAP5Q8WYK1 1306 aa11.83□□□□□ -0.52
TPM3-207ENST00000341372 PTPDC1A2A3K4 754 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms