RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 MSANTD4Q8NCY6 345 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 EIF3CQ99613 913 aaKnown RBP22.28■■□□□ 1.16
SPG7-202ENST00000341316 TUBB2BQ9BVA1 445 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 DUSP10Q9Y6W6 482 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 TCP10L2B9ZVM9 353 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 ENC1O14682 589 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 CYLC1P35663 651 aaPredicted RBP22.28■■□□□ 1.16
SPG7-202ENST00000341316 SLC12A3P55017 1021 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 NELFCDQ8IXH7 590 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 CCDC170Q8IYT3 715 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 TXLNBQ8N3L3 684 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 JAKMIP2Q96AA8 810 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 TSG101Q99816 390 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 MMRN2Q9H8L6 949 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 BMP2KQ9NSY1 1161 aaPredicted RBP22.28■■□□□ 1.16
SPG7-202ENST00000341316 HDAC6Q9UBN7 1215 aa22.28■■□□□ 1.16
SPG7-202ENST00000341316 CLRN2A0PK11 232 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 POTEB2H3BUK9 544 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 MEIS1O00470 390 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 PSMD14O00487 310 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 HNRNPH3P31942 346 aaKnown RBP22.27■■□□□ 1.16
SPG7-202ENST00000341316 SREBF1P36956 1147 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 CDK17Q00537 523 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 Q4G0T1 1027 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 BEND6Q5SZJ8 279 aaPredicted RBP22.27■■□□□ 1.16
SPG7-202ENST00000341316 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 ZNF662Q6ZS27 426 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 KIAA1328Q86T90 577 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 CYP2W1Q8TAV3 490 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 HNRNPLLQ8WVV9 542 aaKnown RBP22.27■■□□□ 1.16
SPG7-202ENST00000341316 ARHGAP20Q9P2F6 1191 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 RAB21Q9UL25 225 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 PRR12Q9ULL5 1215 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 MYO6Q9UM54 1294 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 PLAGL2Q9UPG8 496 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 SPATA31C1P0DKV0 1188 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 NCAPH2Q6IBW4 605 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 FOXR2Q6PJQ5 311 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 KRT26Q7Z3Y9 468 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 SCFD1Q8WVM8 642 aa22.27■■□□□ 1.16
SPG7-202ENST00000341316 SPDYE3A6NKU9 549 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 TRAF5O00463 557 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 HOXA7P31268 230 aaPredicted RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 FKBP3Q00688 224 aaKnown RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 KCNMA1Q12791 1236 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 HERC4Q5GLZ8 1057 aaPredicted RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 CCDC65Q8IXS2 484 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 ACER1Q8TDN7 264 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.26■■□□□ 1.151e-18■■■■■ 75.5
SPG7-202ENST00000341316 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 ATP1A1P05023 1023 aaKnown RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 RHOXF2BP0C7M4 288 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 SLC15A2Q16348 729 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 WHAMMP3Q1A5X7 153 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 TRAPPC11Q7Z392 1133 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 SMCR8Q8TEV9 937 aaPredicted RBP22.26■■□□□ 1.15
SPG7-202ENST00000341316 RHOXF2Q9BQY4 288 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 COL4A3BPQ9Y5P4 624 aa22.26■■□□□ 1.15
SPG7-202ENST00000341316 UTRNP46939 3433 aa22.25■■□□□ 1.15
SPG7-202ENST00000341316 FRMD3A2A2Y4 597 aa22.25■■□□□ 1.15
SPG7-202ENST00000341316 GPS2Q13227 327 aa22.25■■□□□ 1.15
SPG7-202ENST00000341316 BAP1Q92560 729 aa22.25■■□□□ 1.15
SPG7-202ENST00000341316 KCTD10Q9H3F6 313 aa22.25■■□□□ 1.15
SPG7-202ENST00000341316 SPDYE2BA6NHP3 402 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 LRRC53A6NM62 1247 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 MSH4O15457 936 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 SPDYE6P0CI01 402 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 CCDC84Q86UT8 332 aaPredicted RBP22.24■■□□□ 1.15
SPG7-202ENST00000341316 CCDC42Q96M95 316 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 PDE11AQ9HCR9 933 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 ABCB6Q9NP58 842 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.24■■□□□ 1.15
SPG7-202ENST00000341316 COL2A1P02458 1487 aaPredicted RBP22.24■■□□□ 1.15
SPG7-202ENST00000341316 TBX3O15119 743 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 RAD17O75943 681 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 CASP5P51878 434 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 PABPC4Q13310 644 aaKnown RBP eCLIP22.24■■□□□ 1.15
SPG7-202ENST00000341316 RRAGAQ7L523 313 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 CDAN1Q8IWY9 1227 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 IQCDQ96DY2 449 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 ZHX3Q9H4I2 956 aa22.24■■□□□ 1.15
SPG7-202ENST00000341316 CTAGE15A4D2H0 777 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 SLC26A4O43511 780 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 KRT86O43790 486 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 FOSP01100 380 aaPredicted RBP22.23■■□□□ 1.15
SPG7-202ENST00000341316 CTAGE8P0CG41 777 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 CIITAP33076 1130 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
SPG7-202ENST00000341316 HAUS3Q68CZ6 603 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 HDXQ7Z353 690 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 CTAGE6Q86UF2 777 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 CTAGE4Q8IX94 777 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 NOA1Q8NC60 698 aaKnown RBP22.23■■□□□ 1.15
SPG7-202ENST00000341316 TBC1D5Q92609 795 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 SUGCTQ9HAC7 445 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 EMILIN3Q9NT22 766 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 VAV3Q9UKW4 847 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 SRGAP2O75044 1071 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms