RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 EFCAB8A8MWE9 144 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 MSH4O15457 936 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 CYP11B2P19099 503 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 EIF4A3P38919 411 aaKnown RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 PPP4R3AQ6IN85 833 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 POTEAQ6S8J7 498 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 LRRC55Q6ZSA7 311 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 TPH2Q8IWU9 490 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 MYOCDQ8IZQ8 938 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 NAPGQ99747 312 aaPredicted RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 RUSC1Q9BVN2 902 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 NAA15Q9BXJ9 866 aaKnown RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 TTYH3Q9C0H2 523 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 DHX36Q9H2U1 1008 aaKnown RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 DEF6Q9H4E7 631 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 ARHGAP20Q9P2F6 1191 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 TMEM150BA6NC51 233 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 GOLGA6L9A6NEM1 432 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 MOCS3O95396 460 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 SMARCA1P28370 1054 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 RNASE9P60153 205 aaKnown RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 DLGAP5Q15398 846 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 DCAF17Q5H9S7 520 aaPredicted RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 CT47A1Q5JQC4 288 aaPredicted RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 TCERG1LQ5VWI1 586 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 CC2D2BQ6DHV5 1058 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 TATDN1Q6P1N9 297 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 SCFD1Q8WVM8 642 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 LENG9Q96B70 501 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 DNAJC7Q99615 494 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 REEP2Q9BRK0 252 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 IDI2Q9BXS1 227 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 CUEDC2Q9H467 287 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 NYAP2Q9P242 653 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 STK17AQ9UEE5 414 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 CAPN6Q9Y6Q1 641 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 ABCB11O95342 1321 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 NAP1L1P55209 391 aaKnown RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 ZC2HC1CQ53FD0 456 aaPredicted RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 CACNA2D4Q7Z3S7 1137 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 GOLGA1Q92805 767 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 MTMR8Q96EF0 704 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 AGBL1Q96MI9 1066 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 MMS19Q96T76 1030 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 WDR18Q9BV38 432 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 EHD4Q9H223 541 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 GOLPH3Q9H4A6 298 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 JADE2Q9NQC1 790 aa9.81□□□□□ -0.84
SNCA-201ENST00000336904 ZNF70Q9UC06 446 aaPredicted RBP9.81□□□□□ -0.84
SNCA-201ENST00000336904 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 CASP4P49662 377 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 KCNMA1Q12791 1236 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 CNKSR1Q969H4 720 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 CCDC42Q96M95 316 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 LSM14BQ9BX40 385 aaKnown RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 ANKZF1Q9H8Y5 726 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 KCNMB3Q9NPA1 279 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 ZNHIT6Q9NWK9 470 aaKnown RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 SALL4Q9UJQ4 1053 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 CDC23Q9UJX2 597 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 SERPINA10Q9UK55 444 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 AKR1B10O60218 316 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 STAT2P52630 851 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 PDIA5Q14554 519 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 COG2Q14746 738 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 GJB7Q6PEY0 223 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 KRT222Q8N1A0 295 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 RDH13Q8NBN7 331 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 ETNPPLQ8TBG4 499 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 DCAF4Q8WV16 495 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 ELMO3Q96BJ8 720 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 FEZ1Q99689 392 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNCA-201ENST00000336904 TMOD2Q9NZR1 351 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 PACSIN2Q9UNF0 486 aaPredicted RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 SIK3Q9Y2K2 1263 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 MYH10P35580 1976 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 PHACTR2O75167 634 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 NMT1P30419 496 aaKnown RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 VSNL1P62760 191 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 RASSF7Q02833 373 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 SPIRE1Q08AE8 756 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 C2orf54Q08AI8 447 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 STYK1Q6J9G0 422 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 CC2D1AQ6P1N0 951 aaPredicted RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 ZNF771Q7L3S4 317 aaPredicted RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 RSRC2Q7L4I2 434 aaKnown RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 SRGAP1Q7Z6B7 1085 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 OGFOD1Q8N543 542 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 BANK1Q8NDB2 785 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 CCDC51Q96ER9 411 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 STK32BQ9NY57 414 aa9.8□□□□□ -0.84
SNCA-201ENST00000336904 WRAP73Q9P2S5 460 aaPredicted RBP9.8□□□□□ -0.84
SNCA-201ENST00000336904 MYO6Q9UM54 1294 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms