RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR8K1Q8NGG5 319 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 LARP4BQ92615 738 aaKnown RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 NAPGQ99747 312 aaPredicted RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 FGFBP2Q9BYJ0 223 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 ODF2LQ9ULJ1 636 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 DUSP10Q9Y6W6 482 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 EPHB6O15197 1021 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 HLA-DOAP06340 250 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 DDX12PQ92771 950 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 HAS1Q92839 578 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 C7orf25Q9BPX7 421 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 ZHX3Q9H4I2 956 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 THAP9Q9H5L6 903 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 NPR1P16066 1061 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 EEF1GP26641 437 aaKnown RBP15.33■□□□□ 0.05
SF1-202ENST00000334944 SLC1A4P43007 532 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 NEDD9Q14511 834 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 KCTD16Q68DU8 428 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 CCDC47Q96A33 483 aaKnown RBP15.33■□□□□ 0.05
SF1-202ENST00000334944 MMS19Q96T76 1030 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 VEZTQ9HBM0 779 aa15.33■□□□□ 0.05
SF1-202ENST00000334944 SNHG28P0DPA3 235 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 NOVP48745 357 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 QRICH1Q2TAL8 776 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 KRT79Q5XKE5 535 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 SH2D3CQ8N5H7 860 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 DHTKD1Q96HY7 919 aaPredicted RBP15.33■□□□□ 0.04
SF1-202ENST00000334944 TMX4Q9H1E5 349 aaPredicted RBP15.33■□□□□ 0.04
SF1-202ENST00000334944 PCDHA1Q9Y5I3 950 aa15.33■□□□□ 0.04
SF1-202ENST00000334944 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 E9PMD0 336 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 RPSAP08865 295 aaKnown RBP15.32■□□□□ 0.04
SF1-202ENST00000334944 MIIPQ5JXC2 388 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 SH3BP5LQ7L8J4 393 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 COG1Q8WTW3 980 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 CCDC51Q96ER9 411 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 MYO6Q9UM54 1294 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 GRIN2DO15399 1336 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 ZBTB5O15062 677 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 KIAA0754O94854 1291 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 JAG1P78504 1218 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 CUL5Q93034 780 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 SELENOOQ9BVL4 669 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
SF1-202ENST00000334944 FNTAP49354 379 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 AMPD3Q01432 767 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 TSR1Q2NL82 804 aaKnown RBP15.32■□□□□ 0.04
SF1-202ENST00000334944 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
SF1-202ENST00000334944 LACRTQ9GZZ8 138 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 RIC8AQ9NPQ8 531 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 BCCIPQ9P287 314 aaKnown RBP eCLIP15.32■□□□□ 0.04
SF1-202ENST00000334944 MCM8Q9UJA3 840 aa15.32■□□□□ 0.04
SF1-202ENST00000334944 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
SF1-202ENST00000334944 AARSP49588 968 aaKnown RBP eCLIP15.31■□□□□ 0.04
SF1-202ENST00000334944 DNM2P50570 870 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 HERVK_113P62684 666 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 APBA1Q02410 837 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 AOC3Q16853 763 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
SF1-202ENST00000334944 CNNM4Q6P4Q7 775 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 MMRN2Q9H8L6 949 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 PCDHA12Q9UN75 941 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 POTEB3A0JP26 581 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 MACROD2A1Z1Q3 448 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 GOLGA6BA6NDN3 693 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 POTECB2RU33 542 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 MEIS1O00470 390 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 EIF3HO15372 352 aaKnown RBP eCLIP15.31■□□□□ 0.046e-9■□□□□ 8.2
SF1-202ENST00000334944 CCDC122Q5T0U0 273 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 POTEBQ6S5H4 581 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 SMCR8Q8TEV9 937 aaPredicted RBP15.31■□□□□ 0.04
SF1-202ENST00000334944 RAD54LQ92698 747 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 TANGO6Q9C0B7 1094 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 CUEDC2Q9H467 287 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.31■□□□□ 0.04
SF1-202ENST00000334944 CAPN11Q9UMQ6 739 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 KIAA1024Q9UPX6 916 aa15.31■□□□□ 0.04
SF1-202ENST00000334944 HOXA13P31271 388 aaPredicted RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 SLFN13Q68D06 897 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 ARL8AQ96BM9 186 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 BICDL2A1A5D9 508 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 ECE2O60344 883 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 SHOX2O60902 331 aaPredicted RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 ATP2C2O75185 946 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 MYL1P05976 194 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 SMARCA1P28370 1054 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 NT5C2P49902 561 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 USP14P54578 494 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms