RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TAOK3Q9H2K8 898 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 INTS13Q9NVM9 706 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 ZBTB21Q9ULJ3 1066 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 SBF1O95248 1867 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 A0A1B0GTH6 734 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 MARCH6O60337 910 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 RHOBTB3O94955 611 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP11P51784 963 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 SNAP25P60880 206 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 AP3B2Q13367 1082 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 STIM1Q13586 685 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 NR1I3Q14994 352 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 TNIP1Q15025 636 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 SPECC1LQ69YQ0 1117 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 USP17L6PQ6QN14 398 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 CCDC112Q8NEF3 446 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 CDK5RAP3Q96JB5 506 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 PRIMPOLQ96LW4 560 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 C7orf25Q9BPX7 421 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 ANO3Q9BYT9 981 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 GTPBP4Q9BZE4 634 aaKnown RBP9.76□□□□□ -0.85
LSAMP-201ENST00000333617 TRIM9Q9C026 710 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 TMEM39BQ9GZU3 492 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 MTFR1LQ9H019 292 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 GDAQ9Y2T3 454 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 TMX2Q9Y320 296 aa9.76□□□□□ -0.85
LSAMP-201ENST00000333617 COL11A1P12107 1806 aaPredicted RBP9.76□□□□□ -0.85
LSAMP-201ENST00000333617 POTECB2RU33 542 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 J3QL48 77 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 MEIS2O14770 477 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PRCPP42785 496 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 ECE1P42892 770 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 KCNJ6P48051 423 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 MMP14P50281 582 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 STAT2P52630 851 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 ASIC1P78348 528 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 SPAG1Q07617 926 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 TRAF1Q13077 416 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 GRB10Q13322 594 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 USH1GQ495M9 461 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 FILIP1LQ4L180 1135 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 KRT79Q5XKE5 535 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 MOXD1Q6UVY6 613 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 SV2BQ7L1I2 683 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 SPICE1Q8N0Z3 855 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 ADSSL1Q8N142 457 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 GIMAP8Q8ND71 665 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 ACER1Q8TDN7 264 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 ZBED3Q96IU2 234 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 C16orf45Q96MC5 204 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 MYOZ2Q9NPC6 264 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 KCND1Q9NSA2 647 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 EXOC1Q9NV70 894 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PRR12Q9ULL5 1215 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 KIAA1217Q5T5P2 1943 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 SPDYE3A6NKU9 549 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 H7C1D1 291 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 WNT10BO00744 389 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PSMA7O14818 248 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 COBLO75128 1261 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PTPN21Q16825 1174 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 NBPF9Q3BBW0 867 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 APTXQ7Z2E3 356 aaKnown RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 CCAR2Q8N163 923 aaKnown RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 SNX29Q8TEQ0 813 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 LARP4BQ92615 738 aaKnown RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 HAS1Q92839 578 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 UNC93B1Q9H1C4 597 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 SH2D4AQ9H788 454 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 LIMA1Q9UHB6 759 aaKnown RBP9.75□□□□□ -0.85
LSAMP-201ENST00000333617 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
LSAMP-201ENST00000333617 PHIPQ8WWQ0 1821 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 CYP3A7-CYP3A51PA0A087WV96 503 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 UQCRHLA0A096LP55 91 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 NFKBIEO00221 500 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 UQCRHP07919 91 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 TNNT1P13805 278 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 CYP3A7P24462 503 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 CAP2P40123 477 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 PPP1R2P41236 205 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 FAM83BQ5T0W9 1011 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 MIGA2Q7L4E1 593 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms