RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CCDC62Q6P9F0 684 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 VSIG10LQ86VR7 867 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 PIBF1Q8WXW3 757 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
SYN3-201ENST00000332840 CHAMP1Q96JM3 812 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 PSTPIP2Q9H939 334 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 PRDM5Q9NQX1 630 aaPredicted RBP11.1□□□□□ -0.63
SYN3-201ENST00000332840 PDLIM7Q9NR12 457 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 DDX49Q9Y6V7 483 aaKnown RBP11.1□□□□□ -0.63
SYN3-201ENST00000332840 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 SPTBN5Q9NRC6 3674 aaKnown RBP11.09□□□□□ -0.63
SYN3-201ENST00000332840 KIAA0355O15063 1070 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 MBD3O95983 291 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 XBP1P17861 261 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 CDK7P50613 346 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 ITGA7Q13683 1181 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 PGM5Q15124 567 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 SEPT14Q6ZU15 432 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 HEATR3Q7Z4Q2 680 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 BRAPQ7Z569 592 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 CCDC12Q8WUD4 166 aaPredicted RBP11.09□□□□□ -0.63
SYN3-201ENST00000332840 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
SYN3-201ENST00000332840 MTG1Q9BT17 334 aaPredicted RBP11.09□□□□□ -0.63
SYN3-201ENST00000332840 SCAND2PQ9GZW5 306 aaPredicted RBP11.09□□□□□ -0.63
SYN3-201ENST00000332840 TMEM39AQ9NV64 488 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
SYN3-201ENST00000332840 SPDYE3A6NKU9 549 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 FOSP01100 380 aaPredicted RBP11.08□□□□□ -0.64
SYN3-201ENST00000332840 SUPT20HL2P0C7V6 817 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 MYCLP12524 364 aaPredicted RBP11.08□□□□□ -0.64
SYN3-201ENST00000332840 RAG1P15918 1043 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
SYN3-201ENST00000332840 FUT2Q10981 343 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 SAFBQ15424 915 aaKnown RBP eCLIP11.08□□□□□ -0.64
SYN3-201ENST00000332840 KRT40Q6A162 431 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 SLC43A3Q8NBI5 491 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 CDHR1Q96JP9 859 aa11.08□□□□□ -0.64
SYN3-201ENST00000332840 MYH15Q9Y2K3 1946 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 MCM3APO60318 1980 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 MEIS2O14770 477 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 FIBPO43427 364 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 ARIH2O95376 493 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 MYL3P08590 195 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 NAPAP54920 295 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 UBE2HP62256 183 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 ARHGAP1Q07960 439 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 FAAP100Q0VG06 881 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 DGKDQ16760 1214 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 PCNX4Q63HM2 1172 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 FAM173BQ6P4H8 233 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 NFRKBQ6P4R8 1299 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 NLRX1Q86UT6 975 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 DHX37Q8IY37 1157 aaKnown RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 CMTR1Q8N1G2 835 aaKnown RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 GIMAP8Q8ND71 665 aaPredicted RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 PPTC7Q8NI37 304 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 AIFM3Q96NN9 605 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 INPP4AQ96PE3 977 aaPredicted RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 KATNAL1Q9BW62 490 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 BARHL2Q9NY43 387 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 TBX21Q9UL17 535 aa11.07□□□□□ -0.64
SYN3-201ENST00000332840 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
SYN3-201ENST00000332840 TIMP1P01033 207 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 ICAM3P32942 547 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 ADCY7P51828 1080 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 IRX5P78411 483 aaPredicted RBP11.06□□□□□ -0.64
SYN3-201ENST00000332840 AP3B2Q13367 1082 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 GNL2Q13823 731 aaKnown RBP11.06□□□□□ -0.64
SYN3-201ENST00000332840 NEDD9Q14511 834 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 LY6KQ17RY6 165 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 WWC2Q6AWC2 1192 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 USP17L6PQ6QN14 398 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 AFG1LQ8WV93 481 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 SPATA32Q96LK8 384 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 RIC8AQ9NPQ8 531 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 TFIP11Q9UBB9 837 aaKnown RBP11.06□□□□□ -0.64
SYN3-201ENST00000332840 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 NCOR1O75376 2440 aa11.06□□□□□ -0.64
SYN3-201ENST00000332840 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 TRIM43BA6NCK2 446 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 MAFGO15525 162 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 PPFIA4O75335 1185 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 RGS20O76081 388 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 MMP1P03956 469 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 MMP3P08254 477 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 HOXD8P13378 290 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms