RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 IFI35P80217 286 aaPredicted RBP22.51■■□□□ 1.19
CMTM4-201ENST00000330687 KCNK9Q9NPC2 374 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 GGA2Q9UJY4 613 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 POLE2P56282 527 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 LACTBP83111 547 aaPredicted RBP22.51■■□□□ 1.19
CMTM4-201ENST00000330687 SLC30A9Q6PML9 568 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 ZNF662Q6ZS27 426 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 CABP7Q86V35 215 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 SRBD1Q8N5C6 995 aaKnown RBP22.51■■□□□ 1.19
CMTM4-201ENST00000330687 TECP42680 631 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 HEATR3Q7Z4Q2 680 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 NELFCDQ8IXH7 590 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 ORAI2Q96SN7 254 aa22.51■■□□□ 1.19
CMTM4-201ENST00000330687 ZSCAN10Q96SZ4 725 aaPredicted RBP22.51■■□□□ 1.19
CMTM4-201ENST00000330687 SPDYE3A6NKU9 549 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 TRAF5O00463 557 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 KLRC4O43908 158 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 TNFRSF8P28908 595 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 RWDD2BP57060 319 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 ATP11AP98196 1134 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 MREGQ8N565 214 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 GDAP1Q8TB36 358 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 PNMA3Q9UL41 463 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 LONP1P36776 959 aaKnown RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 RNASELQ05823 741 aaKnown RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 RASGRF1Q13972 1273 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 ANKRD20A2Q5SQ80 823 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 ANKRD20A1Q5TYW2 823 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 ANKRD20A3Q5VUR7 823 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 FAM47EQ6ZV65 393 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 CCDC84Q86UT8 332 aaPredicted RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 ERGIC2Q96RQ1 377 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 UTP11Q9Y3A2 253 aaKnown RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 SPATA31A3Q5VYP0 1347 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 PRPF3O43395 683 aaKnown RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 KRT16P08779 473 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 NEFHP12036 1026 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 KRT13P13646 458 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 NQO1P15559 274 aaKnown RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 RBM5P52756 815 aaKnown RBP eCLIP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 LONP2Q86WA8 852 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 MAB21L3Q8N8X9 362 aa22.5■■□□□ 1.19
CMTM4-201ENST00000330687 NOC2LQ9Y3T9 749 aaKnown RBP22.5■■□□□ 1.19
CMTM4-201ENST00000330687 SCG2P13521 617 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 SSR1P43307 286 aaKnown RBP22.49■■□□□ 1.19
CMTM4-201ENST00000330687 C3orf20Q8ND61 904 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 CDK5RAP3Q96JB5 506 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 SEMA6BQ9H3T3 888 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 FGFR1OP2Q9NVK5 253 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 RHOBTB3O94955 611 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 EVX2Q03828 476 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 C11orf91Q3C1V1 193 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 ARMC9Q7Z3E5 817 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 PEX26Q7Z412 305 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 MAGEC3Q8TD91 643 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 INPP4AQ96PE3 977 aaPredicted RBP22.49■■□□□ 1.19
CMTM4-201ENST00000330687 PAIP2Q9BPZ3 127 aaKnown RBP22.49■■□□□ 1.19
CMTM4-201ENST00000330687 DBR1Q9UK59 544 aaKnown RBP22.49■■□□□ 1.19
CMTM4-201ENST00000330687 NWD2Q9ULI1 1742 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 FAM205AQ6ZU69 1335 aa22.49■■□□□ 1.19
CMTM4-201ENST00000330687 TXNRD1Q16881 649 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 LACTB2Q53H82 288 aaPredicted RBP22.48■■□□□ 1.19
CMTM4-201ENST00000330687 EBF2Q9HAK2 575 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 ATP2A2P16615 1042 aaKnown RBP22.48■■□□□ 1.19
CMTM4-201ENST00000330687 BCAMP50895 628 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 MTMR3Q13615 1198 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 NUGGCQ68CJ6 796 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 PDXDC1Q6P996 788 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 LRIG3Q6UXM1 1119 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 GLIS3Q8NEA6 775 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 CABLES1Q8TDN4 633 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 FMO2Q99518 471 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 FAM129AQ9BZQ8 928 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 SNX24Q9Y343 169 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 RTL9Q8NET4 1388 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 GRID2IPA4D2P6 1211 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 H0YGN5 161 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 RNF14Q9UBS8 474 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 NFS1Q9Y697 457 aa22.48■■□□□ 1.19
CMTM4-201ENST00000330687 SMNDC1O75940 238 aaKnown RBP eCLIP22.47■■□□□ 1.19
CMTM4-201ENST00000330687 RANBP1P43487 201 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 CUL1Q13616 776 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 FAM83BQ5T0W9 1011 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 ZNF572Q7Z3I7 529 aaPredicted RBP22.47■■□□□ 1.19
CMTM4-201ENST00000330687 LRRC15Q8TF66 581 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 TRIM9Q9C026 710 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 CPVLQ9H3G5 476 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 SEPT11Q9NVA2 429 aaKnown RBP22.47■■□□□ 1.19
CMTM4-201ENST00000330687 MYH6P13533 1939 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 KLHL33A6NCF5 533 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 PGRMC1O00264 195 aaKnown RBP22.47■■□□□ 1.19
CMTM4-201ENST00000330687 MAN2A1Q16706 1144 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 DENND2CQ68D51 928 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 BLIDQ8IZY5 108 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 FOXO6A8MYZ6 492 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 CYP27B1O15528 508 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 PAPOLBQ9NRJ5 636 aaKnown RBP22.47■■□□□ 1.19
CMTM4-201ENST00000330687 PIK3C2AO00443 1686 aa22.47■■□□□ 1.19
CMTM4-201ENST00000330687 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 HIP1RO75146 1068 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms