RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SPATA4Q8NEY3 305 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLGA5Q8TBA6 731 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 BAP1Q92560 729 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 DNAJC19Q96DA6 116 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 RABEP2Q9H5N1 569 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 CWC15Q9P013 229 aaKnown RBP15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 hCG_1984214I3L0E3 225 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 TULP1O00294 542 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 CDK17Q00537 523 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 GABPAQ06546 454 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 FAM83BQ5T0W9 1011 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 SFMBT2Q5VUG0 894 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 POTEGQ6S5H5 508 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 ZNF713Q8N859 430 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 MTMR8Q96EF0 704 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 PURBQ96QR8 312 aaKnown RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 MED4Q9NPJ6 270 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 FTCDO95954 541 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 SHMT1P34896 483 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 DDR1Q08345 913 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 ORC2Q13416 577 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 SLC9C1Q4G0N8 1177 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 PRR16Q569H4 304 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 ZNF662Q6ZS27 426 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 KRT27Q7Z3Y8 459 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 TBC1D5Q92609 795 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 PACSIN2Q9UNF0 486 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 HYOU1Q9Y4L1 999 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 PCDHAC2Q9Y5I4 1007 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 QRICH1Q2TAL8 776 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 TMEM119Q4V9L6 283 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 KIAA0825Q8IV33 1275 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 AFAP1L1Q8TED9 768 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 NOX5Q96PH1 765 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 RSPH14Q9UHP6 348 aa15.51■□□□□ 0.07
ATP2C1-201ENST00000328560 SYF2O95926 243 aaKnown RBP15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 ALDH1B1P30837 517 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 IRX5P78411 483 aaPredicted RBP15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 ADAM9Q13443 819 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 DNAJC21Q5F1R6 531 aaKnown RBP15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 PPP4R3AQ6IN85 833 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 CDC42EP5Q6NZY7 148 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 DNAAF5Q86Y56 855 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 NLGN1Q8N2Q7 840 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 TEKT1Q969V4 418 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 ADAMTS1Q9UHI8 967 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLGB1Q14789 3259 aaKnown RBP15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 ANKRD65E5RJM6 399 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 PSMD2Q13200 908 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 NAV1Q8NEY1 1877 aa15.5■□□□□ 0.07
ATP2C1-201ENST00000328560 TARSL2A2RTX5 802 aaKnown RBP15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLGA6BA6NDN3 693 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 HNRNPH3P31942 346 aaKnown RBP15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 CYP4A11Q02928 519 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 GPATCH4Q5T3I0 446 aaKnown RBP15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 TCERG1LQ5VWI1 586 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 C10orf67Q8IYJ2 551 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 DBNDD1Q9H9R9 158 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 EMILIN3Q9NT22 766 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 PSD3Q9NYI0 1048 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 MYH10P35580 1976 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 SNHG28P0DPA3 235 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 TCP1P17987 556 aaKnown RBP15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 IQCDQ96DY2 449 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 LCMT1Q9UIC8 334 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 MAST2Q6P0Q8 1798 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 HOXA10P31260 410 aaPredicted RBP15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 COBLL1Q53SF7 1204 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 NT5C3AQ9H0P0 336 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 ATP6V0A2Q9Y487 856 aa15.49■□□□□ 0.07
ATP2C1-201ENST00000328560 ACTN1P12814 892 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 EEF2P13639 858 aaKnown RBP15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 KLHL30Q0D2K2 578 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 C8orf74Q6P047 294 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 IFT81Q8WYA0 676 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 ANO3Q9BYT9 981 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 MED24O75448 989 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 PALMO75781 387 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 CDC37Q16543 378 aaPredicted RBP15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 KCTD19Q17RG1 926 aaPredicted RBP15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 DCAF17Q5H9S7 520 aaPredicted RBP15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 RBM12Q9NTZ6 932 aaKnown RBP15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 DDX60LQ5H9U9 1706 aaKnown RBP15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 ESYT3A0FGR9 886 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 TLR2O60603 784 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 GDF11O95390 407 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 NR2F2P24468 414 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 PSMC6P62333 389 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms