RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PDE6AP16499 860 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 IL9RQ01113 521 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 TMC4Q7Z404 712 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 SCYL3Q8IZE3 742 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 CBX8Q9HC52 389 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 MYO1CO00159 1063 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 LPXNO60711 386 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 DCAF15Q66K64 600 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 USP28Q96RU2 1077 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 CHMP2BQ9UQN3 213 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 ZMYM6O95789 1325 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 POTECB2RU33 542 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 WDR47O94967 919 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 TMOD1P28289 359 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 CDR2LQ86X02 465 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 REREQ9P2R6 1566 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 MTHFSDQ2M296 383 aaKnown RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 JADE1Q6IE81 842 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 EP400NLQ6ZTU2 488 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 SPATA5Q8NB90 893 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 RASSF5Q8WWW0 418 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 MID2Q9UJV3 735 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 PLEKHG1Q9ULL1 1385 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 IPO5O00410 1097 aaKnown RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 KRT81Q14533 505 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 BBS5Q8N3I7 341 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 DYDC2Q96IM9 177 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 LZTS3O60299 673 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 CMA1P23946 247 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 AP2B1P63010 937 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 MRPS35P82673 323 aaKnown RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 AKNAD1Q5T1N1 836 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 GSDMAQ96QA5 445 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 ADPGKQ9BRR6 497 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 IL1RAPL1Q9NZN1 696 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 MYH11P35749 1972 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 ABCC12Q96J65 1359 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 KCNJ18B7U540 433 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 SCG2P13521 617 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 KCNJ12Q14500 433 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 PPP2R5DQ14738 602 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 TRIM71Q2Q1W2 868 aaKnown RBP10.46□□□□□ -0.73
COL12A1-201ENST00000322507 TRIM16LQ309B1 348 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 XAGE2Q96GT9 111 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 hCG_2014768A0A024R1R8 64 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 TET3O43151 1660 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 KRIT1O00522 736 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 CDC42BPBQ9Y5S2 1711 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 CHL1O00533 1208 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 GRK2P25098 689 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 PRPSAP1Q14558 356 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 MMEL1Q495T6 779 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 CAAP1Q9H8G2 361 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 KIF17Q9P2E2 1029 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 AFG3L2Q9Y4W6 797 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 ATP10AO60312 1499 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 WDR91A4D1P6 747 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 DCTN3O75935 186 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 ELF1P32519 619 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
COL12A1-201ENST00000322507 NEO1Q92859 1461 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 EIF3BP55884 814 aaKnown RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 USH1GQ495M9 461 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 C2CD5Q86YS7 1000 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 CATSPER2Q96P56 530 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 GAP43P17677 238 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 ATP13A5Q4VNC0 1218 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 ANO5Q75V66 913 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 PASD1Q8IV76 773 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 MIGA1Q8NAN2 632 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 CDHR1Q96JP9 859 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 TARSL2A2RTX5 802 aaKnown RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 CCDC151A5D8V7 595 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 EIF6P56537 245 aaKnown RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 GPATCH4Q5T3I0 446 aaKnown RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 RINLQ6ZS11 566 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 TRMT1LQ7Z2T5 733 aaKnown RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 WDR60Q8WVS4 1066 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 TRAIPQ9BWF2 469 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 ING2Q9H160 280 aa10.46□□□□□ -0.74
COL12A1-201ENST00000322507 TRPC5Q9UL62 973 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 MRPL11Q9Y3B7 192 aaKnown RBP10.46□□□□□ -0.74
COL12A1-201ENST00000322507 PTPREP23469 700 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 SESN2P58004 480 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 SYCP2LQ5T4T6 812 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 PPP4R3CPQ6ZMV5 832 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 IDH3BO43837 385 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 MTERF3Q96E29 417 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 TCEANC2Q96MN5 208 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 TBX22Q9Y458 520 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 HOXC9P31274 260 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 IL1RL1Q01638 556 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 TFAP4Q01664 338 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 KRT39Q6A163 491 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 IKBIPQ70UQ0 350 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms