RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 F8W8V4 182 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 SYT2Q8N9I0 419 aaPredicted RBP18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 LRRC59Q96AG4 307 aaKnown RBP18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 TLR3O15455 904 aaKnown RBP18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 CCDC159P0C7I6 412 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 ODR4Q5SWX8 454 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 KIAA1024Q9UPX6 916 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 CFLARO15519 480 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 TAF5LO75529 589 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 PYROXD1Q8WU10 500 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 ACSL3O95573 720 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 PDE6AP16499 860 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 STAT2P52630 851 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 WARS2Q9UGM6 360 aaKnown RBP18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 ZFP69BQ9UJL9 534 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 PCDHA13Q9Y5I0 950 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 SYNJ2BP-COX16A0A087WUM0 186 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 GTPBP10A4D1E9 387 aaKnown RBP18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 TAC1P20366 129 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 PDIK1LQ8N165 341 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 COX16Q9P0S2 106 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 SCRN1Q12765 414 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 TERF2Q15554 542 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 G2E3Q7L622 706 aa18.18■□□□□ 0.5
SMCHD1-201ENST00000320876 PAMP19021 973 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 C1orf146Q5VVC0 180 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 TRIM67Q6ZTA4 783 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 PLAAQ9Y263 795 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 USP19O94966 1318 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 CA4P22748 312 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 ZAP70P43403 619 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 FAM47AQ5JRC9 791 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 NUGGCQ68CJ6 796 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 DTNBP1Q96EV8 351 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 UBN1Q9NPG3 1134 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 SUN2Q9UH99 717 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 FIS1Q9Y3D6 152 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 LRRIQ4A6NIV6 560 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 MYO1CO00159 1063 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 P2RX5Q93086 422 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 FRMPD2Q68DX3 1309 aaPredicted RBP18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 LRRN2O75325 713 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 SLC38A10Q9HBR0 1119 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 APOBEC2Q9Y235 224 aaKnown RBP18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 CFAP74Q9C0B2 1584 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 MOCS3O95396 460 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 HOXC9P31274 260 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 TCP10Q12799 353 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 EPM2AIP1Q7L775 607 aaPredicted RBP18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 CLIC6Q96NY7 704 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 TESK2Q96S53 571 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 TEX14Q8IWB6 1497 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 SERPINI2O75830 405 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 NDUFA10O95299 355 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 RWDD2BP57060 319 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 FBXO38Q6PIJ6 1188 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 PNMA1Q8ND90 353 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 HDLBPQ00341 1268 aaKnown RBP18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 YWHAHQ04917 246 aaPredicted RBP18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 SLC39A14Q15043 492 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 VSTM4Q8IW00 320 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 IP6K1Q92551 441 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 THAP9Q9H5L6 903 aa18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 NOVA2Q9UNW9 492 aaKnown RBP18.17■□□□□ 0.5
SMCHD1-201ENST00000320876 KRT37O76014 449 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 RFX1P22670 979 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 DPCR1Q3MIW9 517 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 DNAJC24Q6P3W2 148 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 L3MBTL1Q9Y468 752 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 ECM2O94769 699 aaPredicted RBP18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 NCLNQ969V3 563 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 EYA1Q99502 592 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 NDE1Q9NXR1 346 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 MYOM2P54296 1465 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 ARL4AP40617 200 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 MORF4L2Q15014 288 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 SUCLG2Q96I99 432 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 TRPV6Q9H1D0 765 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 MLXIPQ9HAP2 919 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 LCMT1Q9UIC8 334 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 SNX5Q9Y5X3 404 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 PPARGP37231 505 aaPredicted RBP18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 SLC7A5Q01650 507 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 TFDP1Q14186 410 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 KIF22Q14807 665 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 CACTINQ8WUQ7 758 aaKnown RBP18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 GPKOWQ92917 476 aaPredicted RBP eCLIP18.16■□□□□ 0.52e-6■■■□□ 15.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms