RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ZHX1Q9UKY1 873 aaPredicted RBP8.76□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF106Q9H2Y7 1883 aaKnown RBP8.76□□□□□ -1.01
CNOT4-201ENST00000315544 IDH1O75874 414 aaKnown RBP8.76□□□□□ -1.01
CNOT4-201ENST00000315544 MTA2O94776 668 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 CYP7A1P22680 504 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 ZBED6P86452 979 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 NNTQ13423 1086 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 FAM47AQ5JRC9 791 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 TMEM63BQ5T3F8 832 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 FAM83AQ86UY5 434 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 PNMA8AQ86V59 439 aaPredicted RBP8.76□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF276Q8N554 614 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 HPS3Q969F9 1004 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 RRP36Q96EU6 259 aaKnown RBP8.76□□□□□ -1.01
CNOT4-201ENST00000315544 HSD17B14Q9BPX1 270 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 MKNK2Q9HBH9 465 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 TSKSQ9UJT2 592 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 CTNND2Q9UQB3 1225 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 TCRBV5S1A1TA0A578 114 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 SPP2Q13103 211 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 AOC3Q16853 763 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 RAD54LQ92698 747 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 TLCD1Q96CP7 247 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 NHEJ1Q9H9Q4 299 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 EPN1Q9Y6I3 576 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 GRID2IPA4D2P6 1211 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 DHX15O43143 795 aaKnown RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 CDK8P49336 464 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 FOSBP53539 338 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 GSCP56915 257 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 ITGB3BPQ13352 177 aaPredicted RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 NAB2Q15742 525 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 PDXDC1Q6P996 788 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 UNC13DQ70J99 1090 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 CNGA4Q8IV77 575 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 ZFPM1Q8IX07 1006 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 RASGRP4Q8TDF6 673 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 ANP32BQ92688 251 aaKnown RBP8.75□□□□□ -1.01
CNOT4-201ENST00000315544 P2RX5Q93086 422 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 CTAGE1Q96RT6 745 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 KCNQ5Q9NR82 932 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 CCDC196A0A1B0GTZ2 297 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 EGFRP00533 1210 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 VAV2P52735 878 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 GYS2P54840 703 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 APBA1Q02410 837 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF174Q15697 407 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 WASHC4Q2M389 1173 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 CYP26C1Q6V0L0 522 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 GPKOWQ92917 476 aaPredicted RBP eCLIP8.75□□□□□ -1.013e-6■■■■□ 20.4
CNOT4-201ENST00000315544 CEP95Q96GE4 821 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 EYA3Q99504 573 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
CNOT4-201ENST00000315544 C1QAP02745 245 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 GLI1P08151 1106 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 TOP1P11387 765 aaKnown RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 OAS2P29728 719 aaKnown RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 RHBDF2Q6PJF5 856 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 PNMA1Q8ND90 353 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 GMCL1P1Q8NEA9 526 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 TRPM4Q8TD43 1214 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 PLEKHO2Q8TD55 490 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 CCDC134Q9H6E4 229 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF277Q9NRM2 450 aaPredicted RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 SLC45A1Q9Y2W3 748 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 DAGLAQ9Y4D2 1042 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 IGSF9BQ9UPX0 1349 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 PLA2G6O60733 806 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 FAM153BP0C7A2 387 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 SLURP2P0DP57 97 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 TM4SF4P48230 202 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 CORO7P57737 925 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 TUBB4BP68371 445 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF543Q08ER8 600 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 FAM153CQ494X1 144 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 ANKRD18AQ8IVF6 992 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 KLRG1Q96E93 195 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 HAUS4Q9H6D7 363 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 FAM153AQ9UHL3 310 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 MYO6Q9UM54 1294 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 IQCA1LA6NCM1 817 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 SLC10A3P09131 477 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 CCDC175P0C221 793 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 IVDP26440 423 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 HSPA9P38646 679 aaKnown RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 CYP1B1Q16678 543 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 ZDHHC24Q6UX98 284 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 UBR7Q8N806 425 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 DDX1Q92499 740 aaKnown RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 RPGRQ92834 1020 aaKnown RBP8.74□□□□□ -1.01
CNOT4-201ENST00000315544 ARHGAP28Q9P2N2 729 aa8.74□□□□□ -1.01
CNOT4-201ENST00000315544 ZSCAN12O43309 604 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 FAM189A1O60320 539 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 CYP11B2P19099 503 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 C15orf39Q6ZRI6 1047 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 PIK3AP1Q6ZUJ8 805 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms